MG1655
W3110
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Gene Report : ccmH
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Mol Gen Genet. 1996;252(3):332-41.
The role of the genes nrf EFG and ccmFH in cytochrome c biosynthesis in Escherichia coli.
Grovc J, Busby S, Cole J. ( 8842153 )
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  ccmH
Related strains
     Strains Search Search strains by gene name:  ccmH   Search strains by all related name:  ccmH b2194 ECK2186 JW2182 yejP

General information  (Go to Linear View:)
 Gene Name ccmH  
 Alternative name b2194,ECK2186,JW2182,yejP  
 Location, Length 2,294,692 - 2,295,744 (  -  ) ;   49.39 min ; 1053 (bp) ,   350 (aa) Go to Linear View
 Product heme lyase, CcmH subunit  
 Note ECK2186:JW2182:b2194  
 Function  
 PID 85675301  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) CCMH_ECOLI ( P0ABM9 ; P33925; Q2MAP9 )
    -  Protein name RecName: Full=Cytochrome c-type biogenesis protein ccmH; Flags: Precursor;  
    -  Synonyms  
    -  Gene name Name=ccmH; Synonyms=yejP; OrderedLocusNames=b2194, JW2182;  

 Linear View
View Location
   2285.0  –  2310.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
         PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Cytochrome c-type biogenesis protein ccmH; Flags: Precursor  
        PSI-BLAST
    nr
         BLAST heme lyase, CcmH subunit [Escherichia coli str. K-12 substr. MG1655]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc ccmH 

Sequences
Amino acid
FASTA format 
0001 MRFLLGVLML MISGSALATI DVLQFKDEAQ EQQFRQLTEE LRCPKCQNNS IADSNSMIAT DLRQKVYELM 
0071 QEGKSKKEIV DYMVARYGNF VTYDPPLTPL TVLLWVLPVV AIGIGGWVIY ARSRRRVRVV PEAFPEQSVP 
0141 EGKRAGYVVY LPGIVVALIV AGVSYYQTGN YQQVKIWQQA TAQAPALLDR ALDPKADPLN EEEMSRLALG 
0211 MRTQLQKNPG DIEGWIMLGR VGMALGNASI ATDAYATAYR LDPKNSDAAL GYAEALTRSS DPNDNRLGGE 
0281 LLRQLVRTDH SNIRVLSMYA FNAFEQQRFG EAVAAWEMML KLLPANDTRR AVIERSIAQA MQHLSPQESK
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             acggcatcat tcgctatcgc catgcgggcg 
-070 atctgaatcc tcgcgtctgg gaagaagaga tcaagccgct gtgggagaaa tacagtaagg aggccgcaca 
0001 atgaggtttt tattgggcgt gctgatgctg atgatctccg gctcagcgct ggcgaccatc gatgtgttgc 
0071 agtttaaaga tgaagcacag gaacaacagt tccgtcagct cactgaagaa ctgcgctgcc cgaaatgcca 
0141 gaacaacagc attgccgatt ccaactcgat gattgccacc gacctgcgtc agaaagtgta tgaactgatg 
0211 caggaaggta aaagtaaaaa agagattgtc gattatatgg tggcgcgtta cggcaacttc gtcacttacg 
0281 atccgccgtt aacgccgctg accgtgctgc tgtgggtgct gccagtagtg gctattggca ttggcggttg 
0351 ggtcatatac gcccgctcgc ggcgtcgggt acgcgtggtg ccggaagcgt ttcctgaaca aagcgtgccg 
0421 gaaggtaagc gtgccggata tgttgtttat ctgccgggta ttgtggtggc gttaattgtg gctggcgtca 
0491 gctactacca gactggcaat tatcagcagg tgaaaatctg gcagcaggcc acggcacagg ctccggcgtt 
0561 gctggacagg gcgctggatc cgaaagccga tccgctcaac gaagaagaga tgtcgcgtct tgcgctgggg 
0631 atgcgtactc aactgcaaaa aaatccggga gatatagaag gctggattat gttgggccgc gttggcatgg 
0701 cgctgggtaa cgccagtatc gccaccgatg catacgccac tgcgtatcgc ctcgatccga aaaacagtga 
0771 tgctgcactg ggatacgctg aagcgttgac tcgttcatct gatcccaacg acaaccgcct cggcggtgaa 
0841 ctgctacgtc agctggtgag aacggaccat agcaatatcc gtgtgctaag catgtatgcg tttaatgcct 
0911 ttgagcagca gcgatttggc gaagccgttg ccgcgtggga gatgatgttg aaactcttac ctgccaacga 
0981 tactcgccgt gcggtgattg aacgtagtat cgcgcaggcg atgcaacatt tgtcgccgca ggagagtaaa 
1051 taaaaagagg cccgatggtg atgccatcgg gctagactgt tgacaaagtg cgcttagttt atgccggatg 
1121 cggcgtgaac gccttatccg gcctacaaaa ttg