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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
caiB
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Related strains
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Strains Search
|
Search strains by gene name:
caiB
Search strains by all related name:
caiB b0038 ECK0039 JW0037 yaaN
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General information (Go to Linear View: )
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Gene Name
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caiB
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Alternative name
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b0038,ECK0039,JW0037,yaaN
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Location, Length
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37,898 - 39,115
(
-
)
;
0.82
min
;
1218
(bp) ,
405
(aa)
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Product
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crotonobetainyl CoA:carnitine CoA transferase
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|
Note
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ECK0039:JW0037:b0038
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Function
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PID
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21321920
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SWISS-PROT
(
Show simple
)
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Entry name(Acc.no)
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CAIB_ECOLI
(
P31572
)
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- Protein name
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RecName: Full=Crotonobetainyl-CoA:carnitine CoA-transferase; EC=2.8.3.-;
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- Synonyms
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- Gene name
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Name=caiB; Synonyms=yaaN; OrderedLocusNames=b0038, JW0037;
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- Comments
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FUNCTION:Catalyzes the reversible transfer of the CoA moiety from gamma-butyrobetainyl-CoA to L-carnitine to generate L-carnitinyl-CoA and gamma-butyrobetaine. Is also able to catalyze the reversible transfer of the CoA moiety from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine to generate crotonobetainyl-CoA.
PATHWAY:Amine and polyamine metabolism; carnitine metabolism.
SUBUNIT:Homodimer.
SUBCELLULAR LOCATION:Cytoplasm.
INDUCTION:By L-carnitine or crotonobetaine.
MISCELLANEOUS:Some strains of E.coli, such as ATCC 25922, can metabolize carnitine under aerobiosis.
SIMILARITY:Belongs to the caiB/baiF CoA-transferase family.
CAUTION:Was originally (PubMed:8188598) thought to be an L-carnitine dehydratase.
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| Sequences |
Amino acid
FASTA format
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0001 MDHLPMPKFG PLAGLRVVFS GIEIAGPFAG QMFAEWGAEV IWIENVAWAD TIRVQPNYPQ LSRRNLHALS
0071 LNIFKDEGRE AFLKLMETTD IFIEASKGPA FARRGITDEV LWQHNPKLVI AHLSGFGQYG TEEYTNLPAY
0141 NTIAQAFSGY LIQNGDVDQP MPAFPYTADY FSGLTATTAA LAALHKVRET GKGESIDIAM YEVMLRMGQY
0211 FMMDYFNGGE MCPRMSKGKD PYYAGCGLYK CADGYIVMEL VGITQIEECF KDIGLAHLLG TPEIPEGTQL
0281 IHRIECPYGP LVEEKLDAWL ATHTIAEVKE RFAELNIACA KVLTVPELES NPQYVARESI TQWQTMDGRT
0351 CKGPNIMPKF KNNPGQIWRG MPSHGMDTAA ILKNIGYSEN DIQELVSKGL AKVED
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgcgtcttat caggcctacg ggagcacgaa
-070 tgtaggccgg ataaagcgtt tacgccgcat ccggcagtca tgcgctacat aaatttttca ggagcaaata
0001 atggatcatc tacccatgcc gaaattcggg ccgttggccg gattgcgcgt tgtcttctcc ggtatcgaaa
0071 tcgccggacc gtttgccggg caaatgttcg cagaatgggg cgcggaagtt atctggatcg agaacgtcgc
0141 ctgggccgac accattcgcg ttcaaccgaa ctacccgcaa ctctcccgcc gcaatttgca cgcgctgtcg
0211 ttaaatattt tcaaagatga aggccgcgaa gcgtttctga aattaatgga aaccaccgat atcttcatcg
0281 aagccagtaa aggtccggcc tttgcccgtc gtggcattac cgatgaagta ctgtggcagc acaacccgaa
0351 actggttatc gctcacctgt ccggttttgg tcagtacggc accgaggagt acaccaatct tccggcctat
0421 aacactatcg cccaggcctt tagtggttac ctgattcaga acggtgatgt tgaccagcca atgcctgcct
0491 tcccgtatac cgccgattac ttttctggcc tgaccgccac cacggcggcg ctggcagcac tgcataaagt
0561 gcgtgaaacc ggtaaaggcg aaagtatcga catcgccatg tatgaagtga tgctgcgtat gggccagtac
0631 ttcatgatgg attacttcaa cggcggcgaa atgtgcccgc gcatgagcaa aggtaaagat ccctactacg
0701 ccggttgcgg tctgtataaa tgtgccgacg gctacatcgt gatggaactg gtgggcatta cccaaattga
0771 agagtgcttt aaagatattg gcctcgcaca tctgcttggc acgccagaaa tcccggaagg cactcagctt
0841 atccaccgta tcgaatgccc ttacggccca ctggttgaag agaaactcga tgcctggctg gcgacacata
0911 ccatcgcgga agtaaaagaa cgctttgctg aactgaatat cgcctgcgcc aaagtgctga ccgtaccgga
0981 actggaaagc aatccacagt atgtggctcg cgaatcaatc actcagtggc aaacgatgga tggtcgcacc
1051 tgcaaagggc cgaacatcat gccgaaattc aaaaataacc ccggacaaat ctggcgcgga atgccctcac
1121 atggcatgga cacggctgcc attttgaaaa atatcggcta cagcgaaaac gacattcagg agttggtcag
1191 caaaggtctg gccaaagttg aggactaaac gcgtggcgtc agtcggcttg cctgactagc gcccgcccaa
1261 taacaaacga acaaaaatgg atagaggtgc aatggatatc attggcggac aacatcta
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