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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
gadE
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Related strains
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Strains Search
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Search strains by gene name:
gadE
Search strains by all related name:
gadE b3512 ECK3496 JW3480 yhiE yhiT
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General information (Go to Linear View: )
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Gene Name
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gadE
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Alternative name
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b3512,ECK3496,JW3480,yhiE,yhiT
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Location, Length
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3,981,522 - 3,982,049
(
-
)
;
85.69
min
;
528
(bp) ,
175
(aa)
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Product
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DNA-binding transcriptional activator
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Note
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ECK3496:JW3480:b3512
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Function
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PID
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85676532
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SWISS-PROT
(
Show simple
)
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Entry name(Acc.no)
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GADE_ECOLI
(
P63204
;
P29688; Q2M7H4
)
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- Protein name
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RecName: Full=Transcriptional regulator gadE;
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- Synonyms
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- Gene name
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Name=gadE; Synonyms=yhiE, yhiT; OrderedLocusNames=b3512, JW3480;
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- Comments
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FUNCTION:Regulates the expression of several genes involved in acid resistance. Required for the expression of gadA and gadBC, among others, regardless of media or growth conditions. Binds directly to the 20 bp GAD box found in the control regions of both loci.
INTERACTION:P0AG55:rplF; NbExp=1; IntAct=EBI-562022, EBI-546389;
INDUCTION:By acidic conditions. Could be induced by evgA via the induction of ydeO.
SIMILARITY:Contains 1 HTH luxR-type DNA-binding domain.
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| Sequences |
Amino acid
FASTA format
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0001 MIFLMTKDSF LLQGFWQLKD NHEMIKINSL SEIKKVGNKP FKVIIDTYHN HILDEEAIKF LEKLDAERII
0071 VLAPYHISKL KAKAPIYFVS RKESIKNLLE ITYGKHLPHK NSQLCFSHNQ FKIMQLILKN KNESNITSTL
0141 NISQQTLKIQ KFNIMYKLKL RRMSDIVTLG ITSYF
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 gttcttatag gcgtttacta tattgaacaa
-070 cgattcggac aaggatgtaa ataatgaaaa ggatgacata ttcgaaacga taacggctaa ggagcaagtt
0001 atgatttttc tcatgacgaa agattctttt cttttacagg gcttttggca gttgaaagat aatcacgaaa
0071 tgataaaaat caattccctg tcagagatca aaaaagtagg caataaaccc ttcaaggtta tcattgatac
0141 ctatcacaat catatccttg atgaagaagc gattaaattt ctggagaaat tagatgccga gagaattatt
0211 gttttggcac cttatcacat cagtaaacta aaagctaaag cgcctattta ttttgttagc cgcaaagaaa
0281 gtatcaaaaa tcttcttgag attacttatg gtaaacactt gccccataag aattcacaat tatgtttttc
0351 acataatcag ttcaaaatta tgcaactgat tctgaaaaat aaaaatgaaa gcaatatcac gtcgacgctc
0421 aatatttcgc aacaaacatt aaagattcag aaattcaaca ttatgtacaa gctgaaacta agacgtatga
0491 gcgacatcgt caccctgggt atcacatctt atttttagtc aggacataag caactgaaat tgatggctgg
0561 catgacgagg gatgcagatg ctgatttcat tacccccggt gattactaaa ggagaggcta aaacgact
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