|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
tnaC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
tnaC
Search strains by all related name:
tnaC b3707 ECK3700 JW3685 tnaL
|
General information (Go to Linear View: )
|
|
Gene Name
|
tnaC
|
|
Alternative name
|
b3707,ECK3700,JW3685,tnaL
|
|
Location, Length
|
3,751,906 - 3,751,980
(
-
)
;
80.75
min
;
75
(bp) ,
24
(aa)
|
|
Product
|
tryptophanase leader peptide
|
|
Note
|
ECK3700:JW3685:b3707
|
|
Function
|
|
|
PID
|
85676336
|
|
SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
LPTN_ECOLI
(
P0AD89
;
P09408; Q2M820
)
|
|
- Protein name
|
RecName: Full=Tryptophanase leader peptide;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=tnaL; Synonyms=tnaC; OrderedLocusNames=b3707, JW3685;
|
|
- Comments
|
FUNCTION:Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane.
SUBUNIT:The complex is probably composed of two ATP-binding proteins (lptB) and two transmembrane proteins (lptF and lptG).
SUBCELLULAR LOCATION:Cell inner membrane; Multi-pass membrane protein.
SIMILARITY:Belongs to the lptF/lptG family.
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
tryptophanase leader peptide [Escherichia coli O157:H7 EDL933]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MNILHICVTS KWFNIDNKIV DHRP
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ccgaacgatt gtgattcgat tcacatttaa
-070 acaatttcag aatagacaaa aactctgagt gtaataatgt agcctcgtgt cttgcgagga taagtgcatt
0001 atgaatatct tacatatatg tgtgacctca aaatggttca atattgacaa caaaattgtc gatcaccgcc
0071 cttgatttgc ccttctgtag ccatcaccag agccaaaccg attagattca atgtgatcta tttgtttgct
0141 atatcttaat tttgcctttt gcaaaggtca tctct
|
