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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Mol Gen Genet. 1996;252(3):332-41.
The role of the genes nrf EFG and ccmFH in cytochrome c biosynthesis in Escherichia coli.
Grovc J, Busby S, Cole J.
(
8842153
)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
ccmH
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Related strains
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Strains Search
|
Search strains by gene name:
ccmH
Search strains by all related name:
ccmH b2194 ECK2186 JW2182 yejP
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General information (Go to Linear View: )
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Gene Name
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ccmH
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Alternative name
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b2194,ECK2186,JW2182,yejP
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Location, Length
|
2,294,692 - 2,295,744
(
-
)
;
49.39
min
;
1053
(bp) ,
350
(aa)
|
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Product
|
heme lyase, CcmH subunit
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Note
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ECK2186:JW2182:b2194
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Function
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PID
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85675301
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SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
CCMH_ECOLI
(
P0ABM9
;
P33925; Q2MAP9
)
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- Protein name
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RecName: Full=Cytochrome c-type biogenesis protein ccmH; Flags: Precursor;
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- Synonyms
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- Gene name
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Name=ccmH; Synonyms=yejP; OrderedLocusNames=b2194, JW2182;
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- Comments
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FUNCTION:May be required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase.
INTERACTION:P33927:ccmF; NbExp=1; IntAct=EBI-560309, EBI-763370;
SUBCELLULAR LOCATION:Cell inner membrane; Multi-pass membrane protein.
SIMILARITY:Belongs to the ccmH/cycL/ccl2/nrfF family.
SIMILARITY:Contains 2 TPR repeats.
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| Sequences |
Amino acid
FASTA format
|
0001 MRFLLGVLML MISGSALATI DVLQFKDEAQ EQQFRQLTEE LRCPKCQNNS IADSNSMIAT DLRQKVYELM
0071 QEGKSKKEIV DYMVARYGNF VTYDPPLTPL TVLLWVLPVV AIGIGGWVIY ARSRRRVRVV PEAFPEQSVP
0141 EGKRAGYVVY LPGIVVALIV AGVSYYQTGN YQQVKIWQQA TAQAPALLDR ALDPKADPLN EEEMSRLALG
0211 MRTQLQKNPG DIEGWIMLGR VGMALGNASI ATDAYATAYR LDPKNSDAAL GYAEALTRSS DPNDNRLGGE
0281 LLRQLVRTDH SNIRVLSMYA FNAFEQQRFG EAVAAWEMML KLLPANDTRR AVIERSIAQA MQHLSPQESK
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 acggcatcat tcgctatcgc catgcgggcg
-070 atctgaatcc tcgcgtctgg gaagaagaga tcaagccgct gtgggagaaa tacagtaagg aggccgcaca
0001 atgaggtttt tattgggcgt gctgatgctg atgatctccg gctcagcgct ggcgaccatc gatgtgttgc
0071 agtttaaaga tgaagcacag gaacaacagt tccgtcagct cactgaagaa ctgcgctgcc cgaaatgcca
0141 gaacaacagc attgccgatt ccaactcgat gattgccacc gacctgcgtc agaaagtgta tgaactgatg
0211 caggaaggta aaagtaaaaa agagattgtc gattatatgg tggcgcgtta cggcaacttc gtcacttacg
0281 atccgccgtt aacgccgctg accgtgctgc tgtgggtgct gccagtagtg gctattggca ttggcggttg
0351 ggtcatatac gcccgctcgc ggcgtcgggt acgcgtggtg ccggaagcgt ttcctgaaca aagcgtgccg
0421 gaaggtaagc gtgccggata tgttgtttat ctgccgggta ttgtggtggc gttaattgtg gctggcgtca
0491 gctactacca gactggcaat tatcagcagg tgaaaatctg gcagcaggcc acggcacagg ctccggcgtt
0561 gctggacagg gcgctggatc cgaaagccga tccgctcaac gaagaagaga tgtcgcgtct tgcgctgggg
0631 atgcgtactc aactgcaaaa aaatccggga gatatagaag gctggattat gttgggccgc gttggcatgg
0701 cgctgggtaa cgccagtatc gccaccgatg catacgccac tgcgtatcgc ctcgatccga aaaacagtga
0771 tgctgcactg ggatacgctg aagcgttgac tcgttcatct gatcccaacg acaaccgcct cggcggtgaa
0841 ctgctacgtc agctggtgag aacggaccat agcaatatcc gtgtgctaag catgtatgcg tttaatgcct
0911 ttgagcagca gcgatttggc gaagccgttg ccgcgtggga gatgatgttg aaactcttac ctgccaacga
0981 tactcgccgt gcggtgattg aacgtagtat cgcgcaggcg atgcaacatt tgtcgccgca ggagagtaaa
1051 taaaaagagg cccgatggtg atgccatcgg gctagactgt tgacaaagtg cgcttagttt atgccggatg
1121 cggcgtgaac gccttatccg gcctacaaaa ttg
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