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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yncN
|
|
Related strains
|
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Strains Search
|
Search strains by gene name:
yncN
Search strains by all related name:
yncN b1437 b4532 ECK1431 f65 hicA JW5230
|
General information (Go to Linear View: )
|
|
Gene Name
|
yncN
|
|
Alternative name
|
b1437,b4532,ECK1431,f65,hicA,JW5230
|
|
Location, Length
|
1,511,000 - 1,511,176
(
+
)
;
32.52
min
;
177
(bp) ,
58
(aa)
|
|
Product
|
hypothetical protein
|
|
Note
|
ECK1431:JW5230:b4532
|
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Function
|
|
|
PID
|
85674963
|
|
SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
YNCN_ECOLI
(
P76106
;
Q2MBB8
)
|
|
- Protein name
|
RecName: Full=UPF0395 protein yncN;
|
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- Synonyms
|
|
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- Gene name
|
Name=yncN; OrderedLocusNames=b4532, JW5230;
|
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- Comments
|
SIMILARITY:Belongs to the UPF0395 family.
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
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PDB
|
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PSI-BLAST
|
|
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SWISS-PROT
|
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BLAST
|
|
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PSI-BLAST
|
|
|
nr
|
|
BLAST
|
hypothetical protein [Escherichia coli str. K-12 substr. W3110]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKQSEFRRWL ESQGVDVANG SNHLKLRFHG RRSVMPRHPC DEIKEPLRKA ILKQLGLS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TCTGCCGTTG CGGCGATTTA GTGCTATTTT
-070 CGAGCAAATT ACACACGGAG GTAAACACTA ATGTTTACTT TGTTGATATA CTCAGCGGCA GGGAGGCGAT
0001 gtgaaacaaa gcgagttcag acgttggctc gaatctcagg gcgtcgatgt agcgaatggc agcaaccatt
0071 tgaaactcag gtttcatggg aggcgcagtg tcatgccgcg tcacccctgc gatgagatta aagaaccatt
0141 gcgtaaagca atcctgaaac aactcggttt gagttaaTCG CCAATTAAAA AGGTTAATGA CATGCGAGAG
0211 ACAGTCGAAA TTATGCGTTA TCCCGTCACT CTTACACCCG CGCCGGAAGG CGGTTATATG GTTTCTT
|
