MG1655
W3110
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Gene Report : secF
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  secF
Related strains
     Strains Search Search strains by gene name:  secF   Search strains by all related name:  secF b0409 ECK0403 JW0399

General information  (Go to Linear View:)
 Gene Name secF  
 Alternative name b0409,ECK0403,JW0399  
 Location, Length 428,729 - 429,700 (  +  ) ;   9.23 min ; 972 (bp) ,   323 (aa) Go to Linear View
 Product SecYEG protein translocase auxillary subunit  
 Note ECK0403:JW0399:b0409  
 Function  
 PID 85674549  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) SECF_ECOLI ( P0AG93 ; P19674; P77113; Q2MC17 )
    -  Protein name RecName: Full=Protein-export membrane protein secF;  
    -  Synonyms  
    -  Gene name Name=secF; OrderedLocusNames=b0409, JW0399;  

 Linear View
View Location
   438.729  –  463.729 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
        BLAST  
        PSI-BLAST
    nr
         BLAST preprotein translocase subunit SecF [Escherichia coli UTI89]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc secF 

MMBR References
J Bacteriol. 1995;177:4969-4973
Multicopy suppression of cold-sensitive sec mutations in Escherichia coli.
Danese, P. N., C. K. Murphy, and T. J. Silhavy.

Sequences
Amino acid
FASTA format
0001 MAQEYTVEQL NHGRKVYDFM RWDYWAFGIS GLLLIAAIVI MGVRGFNWGL DFTGGTVIEI TLEKPAEIDV 
0071 MRDALQKAGF EEPMLQNFGS SHDIMVRMPP AEGETGGQVL GSQVLKVINE STNQNAAVKR IEFVGPSVGA 
0141 DLAQTGAMAL MAALLSILVY VGFRFEWRLA AGVVIALAHD VIITLGILSL FHIEIDLTIV ASLMSVIGYS 
0211 LNDSIVVSDR IRENFRKIRR GTPYEIFNVS LTQTLHRTLI TSGTTLMVIL MLYLFGGPVL EGFSLTMLIG 
0281 VSIGTASSIY VASALALKLG MKREHMLQQK VEKEGADQPS ILP

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             GCGACGTCGA TGTTTACCGC GATTGTCGGT 
-070 ACGCGTGCCA TCGTAAACCT GCTATATGGC GGCAAGCGCG TCAAGAAGCT GTCAATCTGA GGAGTGCGAT 
0001 gtggcacagg aatatactgt tgaacaacta aaccacggcc gtaaagtcta tgactttatg cgctgggact 
0071 actgggcttt cggcatctct ggtctgctgt taatcgctgc tatcgttatt atgggcgtgc gcggctttaa 
0141 ctgggggctg gatttcaccg gtggtacggt tattgaaatt acgctcgaaa aaccggctga aattgacgta 
0211 atgcgtgatg cattgcaaaa agccggtttt gaagagccga tgctgcaaaa ctttggtagc agccatgaca 
0281 tcatggtccg tatgccgcct gctgaaggcg aaaccggcgg tcaggtgttg ggcagccagg ttctgaaggt 
0351 gattaacgaa tccaccaatc agaatgcagc agtgaagcgt attgagttcg tcggtccgag cgtgggggca 
0421 gaccttgcgc aaaccggtgc gatggcgttg atggcagcgc tgctgtctat cctcgtgtac gtaggtttcc 
0491 gctttgagtg gcgactggcg gcaggggtgg ttattgcgct ggcgcacgac gttatcatta cgctgggtat 
0561 tttgtcgtta ttccatatcg agattgacct gaccattgtg gcatcgttga tgtcggttat cggttactcg 
0631 cttaacgaca gtatcgtggt atcggaccgt attcgtgaaa acttccgcaa gatccgtcgc ggtacgcctt 
0701 acgaaatctt taacgtgtcc ttgacccaga cgctgcaccg taccttgatc acatccggta ctaccttgat 
0771 ggttatcctg atgctgtacc tcttcggtgg tccggtactg gaaggcttct cgctgaccat gcttatcggt 
0841 gtttccatcg gtactgcatc ttccatctat gtggcatctg cgttggctct gaaactgggt atgaagcgcg 
0911 aacacatgtt gcagcagaaa gtggaaaaag aaggggcgga tcagccgtca attctgccgt aaTCAAGTTC 
0981 CCGTTGATGT TGAAAATCCC GGTCAGAAGA TCGGGATTTT TTTTGATGTA TGGAGATTGC GAAAATCCCC 
1051 GCATCTTGGG AAACTGCGCG TA