PEC Original Annotations
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Essentiality
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Class
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essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
lpxD
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Related strains
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Strains Search
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Search strains by gene name:
lpxD
Search strains by all related name:
lpxD b0179 ECK0178 firA JW0174 omsA ssc
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General information (Go to Linear View:)
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Gene Name
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lpxD
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Alternative name
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b0179,ECK0178,firA,JW0174,omsA,ssc
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Location, Length
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200,971 - 201,996
(
+
)
;
4.33
min
;
1026
(bp) ,
341
(aa)
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Product
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UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase
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Note
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ECK0178:JW0174:b0179
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Function
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PID
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4902920
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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LPXD_ECOLI
(
P21645
)
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- Protein name
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RecName: Full=UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; EC=2.3.1.-; AltName: Full=Protein firA; AltName: Full=Rifampicin resistance protein;
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- Synonyms
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- Gene name
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Name=lpxD; Synonyms=firA, omsA; OrderedLocusNames=b0179, JW0174;
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MMBR References
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J Bacteriol. 1988;170(3):1268-74.
First committed step of lipid A biosynthesis in Escherichia coli: sequence of the lpxA gene.
Coleman J, Raetz CRH.
(
3277952
)
|
Sequences |
Amino acid
FASTA format
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0001 MPSIRLADLA QQLDAELHGD GDIVITGVAS MQSAQTGHIT FMVNPKYREH LGLCQASAVV MTQDDLPFAK
0071 SAALVVKNPY LTYARMAQIL DTTPQPAQNI APSAVIDATA KLGNNVSIGA NAVIESGVEL GDNVIIGAGC
0141 FVGKNSKIGA GSRLWANVTI YHEIQIGQNC LIQSGTVVGA DGFGYANDRG NWVKIPQIGR VIIGDRVEIG
0211 ACTTIDRGAL DDTIIGNGVI IDNQCQIAHN VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC
0281 DKVTVTGMGM VMRPITEPGV YSSGIPLQPN KVWRKTAALV MNIDDMSKRL KSLERKVNQQ D
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 CCAGGATATC GATCTGGTTG TTGATGCAAA
-070 CGCCGTTGCT TACAACAGCA GCGATGTAAA AGACATCACT GCCGACGTAC TGAAACAGGT TAAATAAGTA
0001 atgccttcaa ttcgactggc tgatttagcg cagcagttgg atgcagaact acacggtgat ggcgatatcg
0071 tcatcaccgg cgttgcgtcc atgcaatctg cacaaacagg tcacattacg ttcatggtta acccaaaata
0141 ccgtgagcat ttaggcttgt gccaggcgtc cgcggttgtc atgacccagg acgatcttcc tttcgcgaaa
0211 agtgccgcac tggtagtgaa gaatccctac ctgacttacg cgcgcatggc gcaaatttta gataccacgc
0281 cgcagcccgc gcagaacatt gcacccagtg cggtgatcga cgcgacggcg aagctgggta acaacgtatc
0351 gattggcgct aacgcggtga ttgagtccgg cgttgaactg ggcgataacg tgattatcgg tgccggttgc
0421 ttcgtaggta aaaacagcaa aatcggtgca ggttcgcgtc tctgggcgaa cgtaaccatt taccatgaga
0491 tccagatcgg tcagaattgc ctgatccagt ccggaacagt ggtaggcgca gacggctttg gttatgccaa
0561 cgatcgtggt aactgggtga agatcccaca gattggtcgc gtaattattg gcgatcgcgt ggagatcggt
0631 gcctgcacaa ccatcgatcg cggcgcgctg gatgacacta ttattggcaa tggcgtgatc attgataacc
0701 agtgccagat tgcacataac gtcgtgattg gcgacaatac ggcggttgcc ggtggcgtca ttatggcggg
0771 cagcctgaaa attggtcgtt actgcatgat cggcggagcc agcgtaatca acgggcatat ggaaatatgc
0841 gacaaagtga cggttacggg catgggtatg gtgatgcgtc ccatcactga accaggcgtc tattcctcag
0911 gcattccgct gcaacccaac aaagtctggc gcaaaaccgc tgcactggtg atgaacattg atgacatgag
0981 caagcgtctg aaatcgcttg agcgcaaggt taatcaacaa gactaaCGTT CCATCTTTTG TTCGCCAAAC
1051 TTTACGGCCT GTCTCATTCT TACGATTGCG GCAGGCCGTG TTATTATTGT CGTTTCTTAT ATTTTGACAG
1121 GAAGAG
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