MG1655
W3110
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Deletion Report : OCL36(PC1,PC3-1)
General information
Deletion OCL36(PC1,PC3-1)  
D or ND D  
Location (BP) 3,171,304 - 3,173,841   Go Linear View
Length (BP) 2,538
Related strains
     Strains  
System SD2-D148  
Plasmid Name p(parE)  
Primer
Deleted Region 5' Primer PC2.PC3-1A-CmN  
Sequence 5'-gAAgAAggTTgccAcggcTATgcgccAATggTggATTgcgcTggTgTcccTgTTgATAcc-3'  
3' Primer PC2.PC3-1B-CmC  
Sequence 5'-gcTgcTggAATccATTgTccTggAAcATggcggTgATTcgcAcTTATTcAggcgTAgcAc-3'  
Complemented region 5' Primer 385-1  
Sequence 5'-TgTTccgTTgcgcTgcccggATTAcAggAcggATcTATccgTATTcTgcAgccAg-3'  
Position 3171451  
3' Primer 385-2  
Sequence 5'-cggATAAcAATTTcAcAcAggAAAcAgcTATgAccgATgAAgTgcTggATTAccg-3'  
Position 3173590  

 Linear View (Whole Mode)
View Location
   3170.0  –  3220.0 (KBP)

Sequences
Nucleotide
Fasta Format

View sequence out neighbor 100bp
-00100                                             AACATCACCG TCAGGCGGTA TTGGATCAGT 
-00070 TTGCTAAAAT CGTTCCAACC GTACTGAAAG AAGAAGGTTG CCACGGCTAT GCGCCAATGG TGGATTGCGC 
000001 AGCTGGCGTG AGTTTCCAGT CTATGGCACC GGATTCTATC GTGATGATTG AGCAGTGGGA AAGCATCGCG 
000071 CATCTTGAAG CGCATCTGCA AACCCCGCAC ATGAAGGCGT ATAGCGAAGC CGTAAAAGGT GACGTGCTGG 
000141 AGATGAATAT CCGTATTCTG CAGCCAGGGA TTTAATCCTG CCTTGTTTGC CCGGCCATCC TGACCGGGCA 
000211 ATGTTCTTTC CTTTAAACCT CAATCTCCGC CATGTCGCCT TTCTCTTGCA ACCAGTTGCG GCGATCTTCC 
000281 GAGCGTTTCT TCGCCAGCAG CATATCCATC ATCGCGTCAG TACGCTGATC GTCTTCATCA TCGATAGTCA 
000351 ACTGCACCAG ACGGCGAGTG TTCGGATCAA GCGTGGTTTC GCGCAATTGC ATCGGGTTCA TTTCCCCCAG 
000421 ACCTTTAAAA CGCTGGACGT TCGGCTTGCC TTTCTTGCGT TTTAATTGCT CAAGTACGCC CTCTTTCTCT 
000491 TCTTCCGTCA GCGCGTAATA AACCTCTTTC CCGAGATCAA TACGGTAGAG CGGTGGCAGT GCGACGTAAA 
000561 CGTGACCGTG TTTCACCAAC GCGCGGAAAT GTTTTACGAA CAAAGCGCAG AGCAGCGTGG CAATGTGCAG 
000631 ACCATCAGAG TCCGCATCCG CGAGGATACA GATTTTGCCA TAACGAAGCT GGCTCAGATC GTCGCTGTCA 
000701 GGATCGATAC CGATCGCTAC CGAAATATCG TGCACTTCCT GCGAAGCCAG CACTTCGTCG GAAGAGACTT 
000771 CCCAGGTGTT AAGGATCTTA CCTTTCAGTG GCATGATCGC CTGATATTCG CGATCGCGCG CCTGCTTGGC 
000841 AGATCCGCCT GCGGAGTCAC CTTCCACAAG GAACAGCTCG GTACGGTTAA GGTCCTGCGC GGTACAATCA 
000911 GCCAGTTTGC CAGGCAACGC CGGGCCGCTG GTCAGCTTTT TACGCACCAC TTTTTTGGCC GCACGCATAC 
000981 GGCGCTGGGC GCTGGAAATC GCCATCTCCG CCAGCAGTTC AGCCGCCTGA ACGTTCTGGT TCAGCCACAG 
001051 GATAAAGGCA TCTTTCACCA CGCCAGAAAC GAATGCCGCG CATTGACGCG AAGAGAGACG CTCTTTCGTC 
001121 TGCCCGGCAA ACTGCGGATC CTGCATTTTT ACTGACAGCA CATAGGCGCA GCGATCCCAG ATATCTTCCG 
001191 CCGACAGCTT TACACCGCGC GGCAGAATAT TGCGGTATTC ACAGAACTCA CGCATCGCGT CCAACAGGCC 
001261 CTGACGCAGA CCATTAACAT GGGTACCGCC CTGCATCGTT GGGATAAGGT TGACGTAGCT TTCGGTCAGC 
001331 AGTTCACCGC CTTCCGGCAG CCACAGTAGC GCCCAGTCCA CAGCTTCAGT ATCACCAGCG AAATTACCGA 
001401 TAAACGGTTT TTCCGGCAGC GTCGGCAGAC CATTTACCGC TTCCGCCAGG TAATCATTCA GACCGTCCTG 
001471 ATAGCACCAG CGTTGTTCGG TATTGTTGAT CTCATCTTTA AAAGTGATCT CAACGCCAGG GCACAATACC 
001541 GCTTTGGCTT TCAGCACATG CGTCAGGCGT GAAACAGAAA ATCGCGGGCT GTCAAAGAAG GTTTCATCCG 
001611 GCCAGAAGTG CACACTGGTA CCAGTATTGC GTTTACCGCA AGTGCCGACA ACCTGTAAAT CCTGCACCTT 
001681 TTCGCCATTT TCAAAGGCGA TGTTATAAAC CTGACCATCG CGGCGCACGT TAACTTCTAC GCGCTTCGAC 
001751 AGGGCGTTAA CCACCGAAAT CCCCACGCCA TGCAGGCCGC CAGAGAACTG GTAATTTTTG TTAGAGAATT 
001821 TACCGCCTGC ATGCAGACGG CAAAGAATCA GTTCAACCGC CGGTACACCC TCTTCCGGGT GAATATCCAC 
001891 CGGCATCCCG CGCCCATCGT CAATAACTTC TAACGACTGG TCAGCATGTA AAATAACGTC CACGCGTTTT 
001961 GCGTGACCCG CCAGTGCTTC ATCCACACTG TTATCAATGA CTTCTTGCCC CAAATGGTTA GGGCGAGTGG 
002031 TATCGGTATA CATCCCCGGA CGGCGGCGAA CCGGCTCAAG CCCGGTGAGT ACCTCAATGG CATCAGCGTT 
002101 ATAAGTTTGC GTCATGGTTT AAGTTAGTAA TTCGAGTTGA TCGTCAGAGA TGGTGCAGAC CAAGAAAATC 
002171 GACGATCGGG TTGAAATAAT CTTCGAAGCC CGTGAATGCG TGGTTGCCGC CTTCTATGAC AGTCTGGCGG 
002241 CAGGAAGCGT AGTACGCCAC CGCCTGGCGG TAATCCAGCA CTTCATCTCC CGTCTGTTGC AGCAGCCAGA 
002311 TCAAATCCGG CGCTTCCAGC GGGTCAATCT GCATGACTTT AAGATCGTAA ATATGGCGTG ACTCTAGCAC 
002381 ATATTGCTGC CCGGTGTAGG GGTTCTCGTT CTGACCGAGA TAGTCCGTCA GCAGTTCAAA CGGGCGCACC 
002451 GCCGGGTTTA CCACCACTGC GGGCAGCATA AAACATTGTG ACAACCAGGT GGCGTAATAT CCCCCCAGTG 
002521 ACGAACCGAC AATACCCAGC GAATCACCGC CATGTTCCAG GACAATGGAT TCCAGCAGCT CTGCCGCGTC 
002591 GGAAGGATAC GGCGGCAACT GCGGAATGAT CATCTCAACG TCAGGGTG