General information
|
Deletion
|
OCR12,13-2
|
D or ND
|
D
|
Location (BP)
|
4,263,765 - 4,272,782
|
Length (BP)
|
9,018
|
Related strains
|
Strains
|
|
 |
System
|
SD2-D122
|
Plasmid Name
|
p(ssb)
|
 |
Primer
|
Deleted Region
|
5'
|
Primer
|
R12.13-1A-CmN
|
Sequence
|
5'-TgcggggccgcAgTAcgAcgAcgAATAATAATTATTTTATcTggTgTcccTgTTgATAcc-3'
|
3'
|
Primer
|
R12.13-2B-CmC
|
Sequence
|
5'-gAATcAgAcAccgccAcAATggccAATgATTTTgAccTgA|cAcTTATTcAggcgTAgcAc-3'
|
Complemented region
|
5'
|
Primer
|
479-7
|
Sequence
|
5'-cggATAAcAATTTcAcAcAggAAAcAgcTATgAccAccTTTcccggATTAAAcgc-3'
|
Position
|
4271896
|
3'
|
Primer
|
479-8
|
Sequence
|
5'-TgTTccgTTgcgcTgcccggATTAcAggAcggATcAcgTAgAAgccTccATAAcg-3'
|
Position
|
4272781
|
Sequences
|
Nucleotide
Fasta Format
View sequence out neighbor 100bp
|
-00100 CGGCCCAATC GGGACGGTAC GCCTGACCTT
-00070 TAACGGTCAA TGGTCGCGCT TCGACAACTA TGCGGGGCCG CAGTACGACG ACGAATAATA ATTATTTTAT
000001 GAATTAGGTA ATTAAAGCAA ACACTTATCA AGGAACACAA ATGCAAGCGG CAACTGTTGT GATTAACCGC
000071 CGCGCTCTGC GACACAACCT GCAACGTCTT CGTGAACTGG CCCCTGCCAG TAAAATGGTT GCGGTGGTGA
000141 AAGCGAACGC TTATGGTCAC GGTCTTCTTG AGACCGCGCG AACGCTCCCC GATGCTGACG CCTTTGGCGT
000211 AGCCCGTCTC GAAGAAGCTC TGCGACTGCG TGCGGGGGGA ATCACCAAAC CTGTACTGTT ACTCGAAGGC
000281 TTTTTTGATG CCAGAGATCT GCCGACGATT TCTGCGCAAC ATTTTCATAC CGCCGTGCAT AACGAAGAAC
000351 AGCTGGCTGC GCTGGAAGAG GCTAGCCTGG ACGAGCCGGT TACCGTCTGG ATGAAACTCG ATACCGGTAT
000421 GCACCGTCTG GGCGTAAGGC CGGAACAGGC TGAGGCGTTT TATCATCGCC TGACCCAGTG CAAAAACGTT
000491 CGTCAGCCGG TGAATATCGT CAGCCATTTT GCGCGCGCGG ATGAACCAAA ATGTGGCGCA ACCGAGAAAC
000561 AACTCGCTAT CTTTAATACC TTTTGCGAAG GCAAACCTGG TCAACGTTCC ATTGCCGCGT CGGGTGGCAT
000631 TCTGCTGTGG CCACAGTCGC ATTTTGACTG GGTGCGCCCG GGCATCATTC TTTATGGCGT CTCGCCGCTG
000701 GAAGATCGCT CCACCGGTGC CGATTTTGGC TGTCAGCCAG TGATGTCACT AACCTCCAGC CTGATTGCCG
000771 TGCGTGAGCA TAAAGCCGGA GAGCCTGTTG GTTATGGTGG AACCTGGGTA AGCGAACGTG ATACCCGTCT
000841 TGGCGTAGTC GCGATGGGCT ATGGCGATGG TTATCCGCGC GCCGCGCCGT CCGGTACGCC AGTGCTGGTG
000911 AACGGTCGCG AAGTACCGAT TGTCGGGCGC GTGGCGATGG ATATGATCTG CGTAGACTTA GGTCCACAGG
000981 CGCAGGACAA AGCCGGGGAT CCGGTCATTT TATGGGGCGA AGGTTTGCCC GTAGAACGTA TCGCTGAAAT
001051 GACGAAAGTA AGCGCTTACG AACTTATTAC GCGCCTGACT TCAAGGGTCG CGATGAAATA CGTGGATTAA
001121 TCGTTCTGTA ATATTTGATT GTCTGTGCCG GATGCGGCGT GAATGCCTTA TCCGGCCAAT AAAATCCTAA
001191 AAATTCAATA AGTTGATGTT CTTTCATGCT CTTATAAAGG TCGTGCCTCT GGCGGATGTA CGTTTGTCAT
001261 GAGTCTCACT CTGTTGCTAA TTGCCGTTCG CTCCTGAACA TCCACTCGAT CTTCGCCTTC TTCCGGTTTA
001331 TTGTGTTTTA ACCACCTGCC CGTAAACCTG GAGAACCATC GCGTGTTTCA AAAAGTTGAC GCCTACGCTG
001401 GCGACCCGAT TCTTACGCTT ATGGAGCGTT TTAAAGAAGA CCCTCGCAGC GACAAAGTGA ATTTAAGTAT
001471 CGGTCTGTAC TACAACGAAG ACGGAATTAT TCCACAACTG CAAGCCGTGG CGGAGGCGGA AGCGCGCCTG
001541 AATGCGCAGC CTCATGGCGC TTCGCTTTAT TTACCGATGG AAGGGCTTAA CTGCTATCGC CATGCCATTG
001611 CGCCGCTGCT GTTTGGTGCG GACCATCCGG TACTGAAACA ACAGCGCGTA GCAACCATTC AAACCCTTGG
001681 CGGCTCCGGG GCATTGAAAG TGGGCGCGGA TTTCCTGAAA CGCTACTTCC CGGAATCAGG CGTCTGGGTC
001751 AGCGATCCTA CCTGGGAAAA CCACGTAGCA ATATTCGCCG GGGCTGGATT CGAAGTGAGT ACTTACCCCT
001821 GGTATGACGA AGCGACTAAC GGCGTGCGCT TTAATGACCT GTTGGCGACG CTGAAAACAT TACCTGCCCG
001891 CAGTATTGTG TTGCTGCATC CATGTTGCCA CAACCCAACG GGTGCCGATC TCACTAATGA TCAGTGGGAT
001961 GCGGTGATTG AAATTCTCAA AGCCCGCGAG CTTATTCCAT TCCTCGATAT TGCCTATCAA GGATTTGGTG
002031 CCGGTATGGA AGAGGATGCC TACGCTATTC GCGCCATTGC CAGCGCTGGA TTACCCGCTC TGGTGAGCAA
002101 TTCGTTCTCG AAAATTTTCT CCCTTTACGG CGAGCGCGTC GGCGGACTTT CTGTTATGTG TGAAGATGCC
002171 GAAGCCGCTG GCCGCGTACT GGGGCAATTG AAAGCAACAG TTCGCCGCAA CTACTCCAGC CCGCCGAATT
002241 TTGGTGCGCA GGTGGTGGCT GCAGTGCTGA ATGACGAGGC ATTGAAAGCC AGCTGGCTGG CGGAAGTAGA
002311 AGAGATGCGT ACTCGCATTC TGGCAATGCG TCAGGAATTG GTGAAGGTAT TAAGCACAGA GATGCCAGAA
002381 CGCAATTTCG ATTATCTGCT TAATCAGCGC GGCATGTTCA GTTATACCGG TTTAAGTGCC GCTCAGGTTG
002451 ACCGACTACG TGAAGAATTT GGTGTCTATC TCATCGCCAG CGGTCGCATG TGTGTCGCCG GGTTAAATAC
002521 GGCAAATGTA CAACGTGTGG CAAAGGCGTT TGCTGCGGTG ATGTAATGCA GGAAAGCAGG CTGGAGCTAC
002591 CCAGCCTGCA GTGAAATTAA ACTGTCGTCG CTTTCACTCT TTCTTTATAG ATGATTTTTT TGATGCCATC
002661 GTTCTACGTG AGAGATAATA AACGTTGTTA GTTCTTTTAT TGTTAAGCTT ATCCCAATTA TCTGGAATTC
002731 CTTATCCTGT TTTTTTGGGT GGAGTAATAA TTTCTGCACA TCTAACCATT ATTAAATTTA ATAATAAGTA
002801 TCGGGTTTGT TACGATAGAA TATTTCTATA TCCTCAAGAA TATGCTTTGC CTTATTGCCT GTGACTTTCT
002871 GAGATTCAAT TATAGTATCG TTAAATTCTA ATGTTAAAGA GAACTCTTTT TTCCGCTTTG TGTAAGTTTA
002941 ACCTTATATT GATTACCAAT ATCAAATAAA AAGGTCCTGT AATGAGAATA ATCACCTTTA ACCTCCTCGG
003011 CAAAACAGCA AAGCGTGCAA ATATACATAA AGTCTTTCTT ACCCCTGATT TTGTTAACTA AATCAATAAA
003081 TGCGTGAAAA ACTTTACTTG CAATAGAACT TGATACTTCT TCTCCAGGTC TAAAAAATCT TTTGCAATTT
003151 TTAACTGTGT TTCTATGTAT AAAAAGAAAT CTTTGGCATA AGAGATATCT TTATTATTTA GTGCATCTAG
003221 CTCAACAGGT AAAGATGTCG TTTTGTTGCT ATTCACATAT GATATATTCA TATCATCATC TCCATCGCGA
003291 GTAATAAAAT TAATCACCAT TGTAGGGTAG GGGGCTGGTC AATCAGAAAT CATCTTTATA AACTTCGATT
003361 GTTTTTGTAA TGCTGTATCA TTAAGTTCAT TAAATCGTAC AGCAGATAAA TGTTCTATCA AATTTCGCTC
003431 ATTTGCCGAG GATTCATCAT AATAAACGTA AAATTAATGT ATCCTTACAT CGAGTAATAA ACATTTTTTA
003501 TACAAAAAAA GACAGGAACG TATTTACTGG GTTAAATATA ATCATCCTGC TTTTCATCAC AAAAACCGCA
003571 GATAATCCTT CCTTTCCCCG GCAGCTGGCG TTATGGTCAG ATGGTTTTTG CAACAAATCT CACAATAAAA
003641 AGTTTCAACA TACTGACTAT TTAGGGAAAA ATATGCGCAA GATCACACAG GCAATCAGTG CCGTTTGCTT
003711 ATTGTTCGCT CTAAACAGTT CCGCTGTTGC CCTGGCCTCA TCTCCTTCAC CGCTTAACCC TGGGACTAAC
003781 GTTGCCAGGC TTGCTGAACA GGCACCCATT CATTGGGTTT CGGTCGCACA AATTGAAAAT AGCCTCGCAG
003851 GGCGTCCGCC AATGGCGGTG GGGTTTGATA TCGATGACAC GGTACTTTTT TCCAGTCCGG GCTTCTGGCG
003921 CGGCAAAAAA ACCTTCTCGC CAGAAAGCGA AGATTATCTG AAAAATCCTG TGTTCTGGGA AAAAATGAAC
003991 AATGGCTGGG ATGAATTCAG CATTCCAAAA GAGGTCGCTC GCCAGCTGAT TGATATGCAT GTACGCCGCG
004061 GTGACGCGAT CTTCTTTGTG ACTGGTCGTA GCCCGACGAA AACAGAAACG GTTTCAAAAA CGCTGGCGGA
004131 TAATTTTCAT ATTCCTGCCA CCAACATGAA TCCGGTGATC TTTGCGGGCG ATAAACCAGG GCAAAATACA
004201 AAATCGCAAT GGCTGCAGGA TAAAAATATC CGAATTTTTT ATGGCGATTC TGATAATGAT ATTACCGCCG
004271 CACGCGATGT CGGCGCTCGT GGTATCCGCA TTCTGCGCGC CTCCAACTCT ACCTACAAAC CCTTGCCACA
004341 AGCGGGTGCG TTTGGTGAAG AGGTGATCGT CAATTCAGAA TACTGACAGA GCGGGAGAGC GTGATGCTCT
004411 CCCGAATGCT GTTTTTTTAA TCACACCTTT ATCCTTTCGC TGTCTTGCTG CAAACTGATT AAGAGAGTTT
004481 TATCAAGGAG CAGCACATGT GGTATCAAAA GACGCTCACG CTTAGCGCCA AATCTCGTGG GTTTCATCTG
004551 GTAACGGATG AAATTCTGAA TCAGCTGGCT GATATGCCGC GCGTTAACAT CGGCTTACTG CATCTGTTGC
004621 TGCAACATAC CTCCGCCTCT CTGACACTTA ATGAGAACTG CGATCCCACC GTACGCCACG ACATGGAGCG
004691 TTTTTTCCTC CGCACCGTTC CCGACAACGG AAATTATGAG CATGACTATG AGGGAGCAGA CGATATGCCT
004761 TCTCATATCA AATCCTCAAT GCTGGGAACA TCGCTTGTAT TGCCGGTGCA TAAAGGGCGT ATTCAGACCG
004831 GCACCTGGCA AGGCATTTGG CTGGGGGAAC ATCGCATCCA CGGCGGATCG CGTCGCATCA TCGCGACACT
004901 ACAAGGGGAG TAAAAAATGA CCATTTCGGA GTTGCTACAA TATTGCATGG CAAAACCAGG CGCAGAACAG
004971 AGCGTGCATA ATGACTGGAA AGCGACGCAG ATCAAAGTGG AAGATGTACT GTTTGCGATG GTGAAAGAAG
005041 TAGAAAATCG CCCAGCTGTT TCGCTGAAAA CCAGCCCGGA GCTGGCGGAG CTGCTACGTC AGCAGCACAG
005111 CGATGTGCGT CCAAGCCGCC ATCTGAATAA AGCGCACTGG AGCACCGTGT ATCTCGACGG TTCGCTGCCA
005181 GATTCGCAAA TCTATTATCT GGTGGATGCG TCTTATCAGC AGGCGGTGAA TTTACTGCCG GAAGAAAAAC
005251 GTAAATTGCT GGTGCAACTC TGAAAGGAAA AGGCCGCTCA GAAAGCGGCC TTAACGATTA CAGCATCGGC
005321 TTAAGGAAGC GTGCCGTGTG TGATGCTTCG CACTCCGCGA CGGTTTCTGG CGTACCGGAG ACGAGGATCT
005391 CGCCGCCACC ACTGCCGCCT TCTGGTCCCA GGTCGACAAT CCAGTCAGCG GTTTTGATCA CGTCGAGATT
005461 GTGCTCAATC ACCACAATGG TGTTGCCCTG ATCGCGCAGT TTATGCAGTA CGTCGAGCAG TTGCTGAATA
005531 TCGGCGAAGT GCAGACCGGT GGTCGGCTCG TCGAGAATAT ACAGCGTCTG CCCGGTGCCG CGTTTTGACA
005601 GTTCACGCGC CAGCTTCACG CGCTGGGCTT CACCGCCTGA AAGGGTGGTT GCGGACTGCC CCAGTCGAAT
005671 GTACGTCAGG CCAACGTCCA TCAACGTTTG CAGCTTACGC GCCAGTGCAG GTACGGCATC AAAGAACTCA
005741 CGCGCCTCTT CGATGGTCAT ATCCAGCACT TCGTGGATGG TTTTGCCTTT GTACTTAATC TCCAGCGTTT
005811 CACGGTTATA GCGTTTACCT TTGCACTGGT CGCACGGCAC GTAGATATCC GGCAGGAAGT GCATCTCCAC
005881 TTTGATCACG CCATCGCCCT GACAGGCCTC GCAGCGTCCG CCACGAACGT TAAAGCTGAA ACGTCCCGGC
005951 GTATAGCCGC GCGCACGGGA TTCCGGTACG CCCGCAAACA GTTCGCGCAC AGGCGTAAAC ACGCCGGTAT
006021 AGGTCGCCGG GTTAGAACGT GGAGTACGAC CAATTGGGCT TTGGTCGATA TCGATCACTT TATCGAAATG
006091 CTCCAGCCCC TGAATATCGC GATACGGTGC TGGTTCGGCG ATGGTCGCCC CATTCAACTG GCGTTGGGCA
006161 ATCGGGAACA GTGTGTCGTT AATCAGCGTC GATTTACCGG AACCTGAAAC CCCGGTGATG CAGGTAAACA
006231 GACCCACCGG CAGCGTCAGC GTCACGTCCT TCAGGTTGTT GCCGCGTGCG CCTGTCAGCT TCAGCACTTT
006301 TTCCGGATTC GCCGGAACGC GTTTCTTCGG CACTTCAATC TTGCGTTTGC CGCTCATGTA CTGCCCGGTC
006371 AACGACTCCG GCACCGCCAT AATCGCTTCC AGCGGACCTT CTGCGACCAC TTCACCGCCG TGAACACCTG
006441 CGCCCGGGCC AATGTCGATC ACATGGTCAG CGGCGCGAAT TGCGTCTTCG TCGTGCTCCA CCACAATCAC
006511 GGTATTACCG AGATCGCGCA GATGGATAAG CGTACCCAAC AGGCGCTCGT TATCACGCTG GTGCAGGCCG
006581 ATAGACGGCT CGTCCAGCAC GTACATAACG CCAACCAGGC CCGCACCAAT CTGGCTCGCC AGACGGATAC
006651 GCTGTGCTTC ACCGCCAGAA AGCGTTTCTG CCGAGCGGGA AAGCGTCAGG TAATTCAGGC CGACGTTAAC
006721 GAGGAATTTC AGACGATCGC CGATCTCTTT AAGGATTTTT TCTGCAATCT TCGCCCGCTG ACCTGCGAGT
006791 TTGAGATTGT TGAAGAATTC CATCGCATGA CCAATGCTCA TGTCGGAGAT AGCAGGCAGC GGCGTATTCT
006861 CGACATACAC GTGGCGCGCT TCCCGACGCA GACGCGTCCC TTCGCAGCTG GCGCACGGAC GATTACTGAT
006931 AAACTTGGCT AATTCTTCGC GTACCGCGCT GGATTCCGTC TCTTTATAGC GGCGCTCCAT ATTATGCAGC
007001 ACGCCTTCGA ACGGATGACG ACGAATGGAG GTATCGCCAC GATCGTTCAT GTATTTGAAT TCAATGTTTT
007071 CTTTGCCAGA ACCGTACAAC ACCACTTTAT GCACGTTCGC GCTCAGGCTG CCCCACGGCG CTTCGACGTC
007141 GAACTTATAG TGATCTGCCA GCGATTTCAG CATCTGGAAA TAATAGAAGT TGCGGCGATC CCAGCCACGG
007211 ATCGCACCAC CAGCCAGCGA CAGTTCCGGA TTCTGGATCA CTCGATCAGG ATCGAAATAT TGCTGTACGC
007281 CAAGGCCGTC GCAGGTCGGG CAGGCCCCCG CCGGGTTGTT AAACGAAAAC AGTCGCGGCT CCAGTTCACG
007351 CATACTGTAG CCGCAAATTG GGCAGGCGAA GTTGGCGGAG AACAGCAGCT CTTCCGCTTT CGGGTCGTCC
007421 ATATCCGCCA CTACCGCGGT ACCACCGGAA AGCTCCAGCG CGGTTTCAAA TGACTCGGCA AGACGTTGGG
007491 TAAGATCGTC ACGCACCTTG AAGCGATCAA CCACCACTTC AATGGTATGT TTCTTTTGCA GTTCCAGTTT
007561 TGGCGGATCG GAAAGATCGC AGACTTCGCC ATCAATACGA GCACGGATGT AGCCCTGGCT TGCCAGGTTC
007631 TCCAGCGTTT TGGTGTGTTC GCCTTTGCGC TCTTTAATGA TTGGCGCGAG TAGCATCAGA CGCTTGCCTT
007701 CCGGCTGCGA CAGCACGTTA TCCACCATCT GGCTGACGGT TTGCGCCGCC AGCGGGACGT CGTGGTCCGG
007771 ACAGCGCGGC TCGCCAACGC GGGCGAATAA CAAACGCAAA TAGTCGTGGA TTTCGGTGAT TGTCCCCACC
007841 GTAGAACGCG GGTTATGAGA CGTCGATTTC TGCTCAATTG AGATGGCAGG AGAAAGCCCC TCAATATGAT
007911 CGACGTCCGG CTTTTCCATC AGTGACAGAA ACTGCCGCGC GTAGGCGGAA AGGGATTCAA CGTAACGGCG
007981 CTGCCCTTCG GCATATAAGG TGTCGAAAGC GAGCGAGGAT TTGCCAGAAC CCGAAAGCCC GGTCACGACA
008051 ATGAGCTTGT CGCGGGGGAT AACGAGGTTG ATGTTTTTGA GATTATGGGT GCGGGCGCCC CGAACTTCGA
008121 TCTTATCCAT TCACCTTTCC CGGATTAAAC GCTTTTTTGC CCGGTGGCAT GGTGCTACCG GCGATCACAA
008191 ACGGTTAATT ATGACACAAA TTGACCTGAA TGAATATACA GTATTGGAAT GCATTACCCG GAGTGTTGTG
008261 TAACAATGTC TGGCCAGGTT TGTTTCCCGG AACCGAGGTC ACAACATAGT AAAAGCGCTA TTGGTAATGG
008331 TACAATCGCG CGTTTACACT TATTCAGAAC GATTTTTTTC AGGAGACACG AACATGGCCA GCAGAGGCGT
008401 AAACAAGGTT ATTCTCGTTG GTAATCTGGG TCAGGACCCG GAAGTACGCT ACATGCCAAA TGGTGGCGCA
008471 GTTGCCAACA TTACGCTGGC TACTTCCGAA TCCTGGCGTG ATAAAGCGAC CGGCGAGATG AAAGAACAGA
008541 CTGAATGGCA CCGCGTTGTG CTGTTCGGCA AACTGGCAGA AGTGGCGAGC GAATATCTGC GTAAAGGTTC
008611 TCAGGTTTAT ATCGAAGGTC AGCTGCGTAC CCGTAAATGG ACCGATCAAT CCGGTCAGGA TCGCTACACC
008681 ACAGAAGTCG TGGTGAACGT TGGCGGCACC ATGCAGATGC TGGGTGGTCG TCAGGGTGGT GGCGCTCCGG
008751 CAGGTGGCAA TATCGGTGGT GGTCAGCCGC AGGGCGGTTG GGGTCAGCCT CAGCAGCCGC AGGGTGGCAA
008821 TCAGTTCAGC GGCGGCGCGC AGTCTCGCCC GCAGCAGTCC GCTCCGGCAG CGCCGTCTAA CGAGCCGCCG
008891 ATGGACTTTG ATGATGACAT TCCGTTCTGA TTTGTCATTA AAACAATAGG TTATATTGTT TTAAGGTGGA
008961 TGATTAAAGC ATCTGCCAGC CATAAAAAAG AAGCCTCCGT TATGGAGGCT TCTACGTATC AGGTCAAAAT
009031 CATTGGCCAT TGTGGCGGTG TCTGATTCAT CTCTTCTATC ATCACCGACT CGATGTTGTG CCAGATAGCG
009101 GTGATGTCCG CCATTGTG
|