General information
|
Deletion
|
OCR52,53-2
|
D or ND
|
D
|
Location (BP)
|
960,424 - 965,806
|
Length (BP)
|
5,383
|
Related strains
|
Strains
|
|
 |
System
|
SD2-D95
|
Plasmid Name
|
p(rpsA)
|
 |
Primer
|
Deleted Region
|
5'
|
Primer
|
R52.53-1A-CmN
|
Sequence
|
5'-gcggTTATgTTAAcggTAcgccTgTTTTAAggAgATAAAg|cTggTgTcccTgTTgATAcc-3'
|
3'
|
Primer
|
R52.53-2B-CmC
|
Sequence
|
5'-gcATTcAAAAAAccAgcATTTgTTgAAATAgccgcATATT|cAcTTATTcAggcgTAgcAc-3'
|
Complemented region
|
5'
|
Primer
|
193-41
|
Sequence
|
5'-cggATAAcAATTTcAcAcAggAAAcAgcTATgAccATTTTccTTgAcgccTccTc-3'
|
Position
|
960856
|
3'
|
Primer
|
193-42
|
Sequence
|
5'-TgTTccgTTgcgcTgcccggATTAcAggAcggATccgcccTTAgTgcTTgATTAc-3'
|
Position
|
962982
|
Sequences
|
Nucleotide
Fasta Format
View sequence out neighbor 100bp
|
-00100 GACAAAACTG GTTTTTGCAC ACAACGTTAA
-00070 CGATTTGTGG CGTCGGCGCG TATAATGCGC GCGGTTATGT TAACGGTACG CCTGTTTTAA GGAGATAAAG
000001 ATGACGGCAA TTGCCCCGGT TATTACCATT GATGGCCCAA GCGGTGCAGG GAAAGGCACC TTGTGTAAGG
000071 CTATGGCGGA AGCGTTGCAA TGGCATCTGC TGGACTCGGG TGCAATTTAT CGCGTACTGG CATTGGCGGC
000141 ATTACATCAC CATGTTGATG TTGCGTCGGA AGATGCGCTG GTACCGCTGG CATCCCATCT GGATGTACGT
000211 TTTGTGTCGA CCAATGGCAA TCTGGAAGTG ATCCTCGAAG GGGAAGATGT CAGCGGCGAA ATTCGTACTC
000281 AGGAAGTGGC GAATGCAGCT TCACAAGTCG CGGCATTCCC ACGCGTTCGT GAAGCATTAT TGCGTCGCCA
000351 ACGCGCGTTT CGCGAATTAC CAGGTCTGAT TGCCGATGGC CGCGACATGG GAACGGTGGT ATTCCCTGAT
000421 GCACCAGTGA AAATTTTCCT TGACGCCTCC TCGGAAGAAC GTGCGCATCG CCGCATGCTA CAGTTGCAGG
000491 AGAAGGGCTT TAGTGTTAAC TTTGAGCGCC TTTTGGCCGA GATCAAAGAA CGCGACGACC GCGATCGTAA
000561 CCGAGCGGTA GCGCCACTGG TTCCGGCAGC CGATGCTTTA GTGTTGGATT CCACCACCTT AAGCATTGAG
000631 CAAGTGATTG AAAAAGCGCT ACAATACGCG CGCCAGAAAT TGGCTCTCGC ATAAGCGACC GAATTTGCAG
000701 TACCCCCGTT GCAATGGAAT GACAGCGGGT ATGTTAAACA ACCCCATCCG GCATGGAGCC AGGTGGACGT
000771 TAAATATAAA CCTGAAGATT AAACATGACT GAATCTTTTG CTCAACTCTT TGAAGAGTCC TTAAAAGAAA
000841 TCGAAACCCG CCCGGGTTCT ATCGTTCGTG GCGTTGTTGT TGCTATCGAC AAAGACGTAG TACTGGTTGA
000911 CGCTGGTCTG AAATCTGAGT CCGCCATCCC GGCTGAGCAG TTCAAAAACG CCCAGGGCGA GCTGGAAATC
000981 CAGGTAGGTG ACGAAGTTGA CGTTGCTCTG GACGCAGTAG AAGACGGCTT CGGTGAAACT CTGCTGTCCC
001051 GTGAGAAAGC TAAACGTCAC GAAGCCTGGA TCACGCTGGA AAAAGCTTAC GAAGATGCTG AAACTGTTAC
001121 CGGTGTTATC AACGGCAAAG TTAAGGGCGG CTTCACTGTT GAGCTGAACG GTATTCGTGC GTTCCTGCCA
001191 GGTTCTCTGG TAGACGTTCG TCCGGTGCGT GACACTCTGC ACCTGGAAGG CAAAGAGCTT GAATTTAAAG
001261 TAATCAAGCT GGATCAGAAG CGCAACAACG TTGTTGTTTC TCGTCGTGCC GTTATCGAAT CCGAAAACAG
001331 CGCAGAGCGC GATCAGCTGC TGGAAAACCT GCAGGAAGGC ATGGAAGTTA AAGGTATCGT TAAGAACCTC
001401 ACTGACTACG GTGCATTCGT TGATCTGGGC GGCGTTGACG GCCTGCTGCA CATCACTGAC ATGGCCTGGA
001471 AACGCGTTAA GCATCCGAGC GAAATCGTCA ACGTGGGCGA CGAAATCACT GTTAAAGTGC TGAAGTTCGA
001541 CCGCGAACGT ACCCGTGTAT CCCTGGGCCT GAAACAGCTG GGCGAAGATC CGTGGGTAGC TATCGCTAAA
001611 CGTTATCCGG AAGGTACCAA ACTGACTGGT CGCGTGACCA ACCTGACCGA CTACGGCTGC TTCGTTGAAA
001681 TCGAAGAAGG CGTTGAAGGC CTGGTACACG TTTCCGAAAT GGACTGGACC AACAAAAACA TCCACCCGTC
001751 CAAAGTTGTT AACGTTGGCG ATGTAGTGGA AGTTATGGTT CTGGATATCG ACGAAGAACG TCGTCGTATC
001821 TCCCTGGGTC TGAAACAGTG CAAAGCTAAC CCGTGGCAGC AGTTCGCGGA AACCCACAAC AAGGGCGACC
001891 GTGTTGAAGG TAAAATCAAG TCTATCACTG ACTTCGGTAT CTTCATCGGC TTGGACGGCG GCATCGACGG
001961 CCTGGTTCAC CTGTCTGACA TCTCCTGGAA CGTTGCAGGC GAAGAAGCAG TTCGTGAATA CAAAAAAGGC
002031 GACGAAATCG CTGCAGTTGT TCTGCAGGTT GACGCAGAAC GTGAACGTAT CTCCCTGGGC GTTAAACAGC
002101 TCGCAGAAGA TCCGTTCAAC AACTGGGTTG CTCTGAACAA GAAAGGCGCT ATCGTAACCG GTAAAGTAAC
002171 TGCAGTTGAC GCTAAAGGCG CAACCGTAGA ACTGGCTGAC GGCGTTGAAG GTTACCTGCG TGCTTCTGAA
002241 GCATCCCGTG ACCGCGTTGA AGACGCTACC CTGGTTCTGA GCGTTGGCGA CGAAGTTGAA GCTAAATTCA
002311 CCGGCGTTGA TCGTAAAAAC CGCGCAATCA GCCTGTCTGT TCGTGCGAAA GACGAAGCTG ACGAGAAAGA
002381 TGCAATCGCA ACTGTTAACA AACAGGAAGA TGCAAACTTC TCCAACAACG CAATGGCTGA AGCTTTCAAA
002451 GCAGCTAAAG GCGAGTAATT CTCTGACTCT TCGGGATTTT TATTCCGAAG TTTGTTGAGT TTACTTGACA
002521 GATTGCAGGT TTCGTCCTGT AATCAAGCAC TAAGGGCGGC TACGGCCGCC CTTAATCAAT GCAGCAACAG
002591 CAGCCGCTTA ATTTGCCTTT AAGGAACCGG AGGAATCATG ACCAAGTCAG AATTGATAGA AAGACTTGCC
002661 ACCCAGCAAT CGCACATTCC CGCCAAGACG GTTGAAGATG CAGTAAAAGA GATGCTGGAG CATATGGCCT
002731 CGACTCTTGC GCAGGGCGAG CGTATTGAAA TCCGCGGTTT CGGCAGTTTC TCTTTGCACT ACCGCGCACC
002801 ACGTACCGGA CGTAATCCGA AGACTGGCGA TAAAGTAGAA CTGGAAGGAA AATACGTTCC TCACTTTAAA
002871 CCTGGTAAAG AACTGCGCGA TCGCGCCAAT ATTTACGGTT AAGTTTTTTA CTCAAACTTG AACGAGAGAA
002941 AAGCACCTGT CGGGTGCTTT TTTCATTTCT CTAATCTGGA ACTGGAAGCT GCCTCGCAGA GTTTTGAACA
003011 GTTTTCACCC TTTCGTTAAA TTCTTCTGAA TATGCCTCGG GGAACGCAAA ATTCCCACCA GACAACCGCT
003081 CAACAAAGTT GCACACTTTC CATAAACAGG GAGGGGTGCA TGAAAATAAC GACAGTCGGT GTATGCATAA
003151 TTAGCGGAAT TTTTCCGTTG CTGATTTTGC CCCAATTGCC TGGGACATTA ACCCTTGCGT TTCTGACTCT
003221 CTTCGCCTGC GTACTGGCAT TTATCCCTGT TAAAACCGTC CGTTATATCG CGCTGACGTT GCTGTTTTTC
003291 GTTTGGGGCA TATTATCAGC AAAGCAAATT TTGTGGGCAG GAGAAACCTT AACTGGCGCG ACGCAGGATG
003361 CAATTGTTGA GATCACTGCA ACTGACGGCA TGACCACTCA TTACGGTCAA ATTACTCATC TACAAGGTCG
003431 ACGTATATTC CCTGCGTCAG GTCTCGTGAT GTATGGCGAA TATCTTCCGC AAGCGGTTTG TGCTGGACAA
003501 CAATGGTCAA TGAAACTCAA AGTTCGTGCA GTTCATGGCC AACTTAATGA TGGCGGCTTT GATAGCCAGC
003571 GTTATGCCAT TGCCCAGCAT CAGCCGCTCA CCGGCCGTTT TCTGCAGGCA AGTGTCATTG AACCGAATTG
003641 TAGCCTGCGT GCACAGTATC TGGCGTCACT ACAAACAACG CTGCAACCCT ATCCGTGGAA TGCGGTTATT
003711 CTTGGTTTAG GTATGGGGGA ACGGTTATCC GTCCCCAAAG AAATCAAAAA TATCATGCGC GATACTGGAA
003781 CGGCGCATTT AATGGCGATA TCGGGATTGC ACATCGCTTT TGCGGCGTTG CTGGCTGCCG GACTCATTCG
003851 CAGTGGACAA ATTTTTCTGC CTGGGCGCTG GATCCACTGG CAAATACCAT TAATTGGCGG AATCTGCTGT
003921 GCTGCTTTTT ATGCCTGGTT GACGGGAATG CAACCTCCTG CATTGCGTAC CATGGTGGCG CTTGCTACGT
003991 GGGGAATGCT TAAGTTAAGT GGGCGACAGT GGAGTGGCTG GGATGTATGG ATATGTTGTC TGGCGGCAAT
004061 TTTGCTGATG GATCCTGTTG CCATTCTCTC GCAAAGTTTA TGGCTCTCTG CCGCTGCGGT CGCGGCATTG
004131 ATATTTTGGT ATCAGTGGTT TCCCTGTCCT GAGTGGCAAC TGCCGCCGGT ATTGCGTGCA GTTGTTTCCC
004201 TCATCCATCT GCAACTGGGA ATCACACTTC TGCTTATGCC CGTGCAAATC GTCATATTTC ATGGCATTAG
004271 TCTGACCTCG TTTATTGCAA ATCTATTAGC AATTCCCTTG GTGACATTTA TCACGGTTCC GTTGATCCTC
004341 GCCGCGATGG TTGTGCATTT AAGCGGGCCG TTAATCCTGG AGCAAGGGTT ATGGTTTCTT GCCGACCGGT
004411 CTTTGGCTTT ACTTTTCTGG GGGTTAAAGA GTTTGCCGGA AGGGTGGATC AACATTGCTG AATGTTGGCA
004481 ATGGCTATCA TTTTCCCCAT GGTTCTTACT GGTGGTATGG CGATTAAACG CCTGGCGAAC GTTGCCAGCA
004551 ATGTGTGTGG CTGGAGGCTT GCTGATGTGC TGGCCGCTGT GGCAAAAACC TCGACCTGAC GAGTGGCAGC
004621 TGTACATGCT TGATGTCGGG CAAGGGCTGG CAATGGTGAT AGCCAGAAAC GGCAAAGCGA TTCTCTATGA
004691 CACAGGACTG GCCTGGCCTG AAGGGGATAG TGGGCAACAA CTGATTATCC CCTGGCTCCA CTGGCATAAT
004761 CTTGAACCGG AAGGCGTTAT TCTGAGCCAT GAACATCTGG ATCACCGGGG AGGGCTGGAT TCAATATTGC
004831 ATATATGGCC GATGTTATGG ATCAGAAGTC CGTTAAACTG GGAACATCAT CAGCCCTGTG TGCGTGGCGA
004901 AGCGTGGCAA TGGCAAGGAT TGCGTTTCAG CGCGCACTGG CCTTTACAAG GTAGCAACGA TAAAGGAAAT
004971 AACCATTCCT GTGTGGTTAA GGTTGATGAC GGGACGAATA GCATTCTTCT AACCGGTGAT ATTGAAGCCC
005041 CAGCTGAACA AAAGATGCTA AGCCGTTACT GGCAGCAAGT GCAGGCAACA TTGCTTCAGG TACCTCACCA
005111 TGGCAGTAAT ACCTCATCAT CGTTGCCATT AATTCAGCGA GTGAATGGAA AAGTGGCACT CGCATCGGCA
005181 TCGCGCTATA ACGCATGGCG ACTGCCCTCT AACAAAGTTA AGCATCGCTA TCAACTGCAA GGATATCAAT
005251 GGATTGATAC TCCACATCAA GGTCAAACAA CGGTCAATTT TTCAGCGCAA GGCTGGCGGA TTAGCAGCCT
005321 CAGGGAGCAA ATTTTACCTC GTTGGTATCA TCAGTGGTTT GGCGTGCCAG TGGATAACGG GTAGAATATG
005391 CGGCTATTTC AACAAATGCT GGTTTTTTGA ATGCATAACG ACAAAGATCT CTCTACGTGG CAGACATTCC
005461 GCCGACTGTG GCCAACCATT GCG
|