MG1655
W3110
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Deletion Report : OCR52,53-2
General information
Deletion OCR52,53-2  
D or ND D  
Location (BP) 960,424 - 965,806   Go Linear View
Length (BP) 5,383
Related strains
     Strains  
System SD2-D95  
Plasmid Name p(rpsA)  
Primer
Deleted Region 5' Primer R52.53-1A-CmN  
Sequence 5'-gcggTTATgTTAAcggTAcgccTgTTTTAAggAgATAAAg|cTggTgTcccTgTTgATAcc-3'  
3' Primer R52.53-2B-CmC  
Sequence 5'-gcATTcAAAAAAccAgcATTTgTTgAAATAgccgcATATT|cAcTTATTcAggcgTAgcAc-3'  
Complemented region 5' Primer 193-41  
Sequence 5'-cggATAAcAATTTcAcAcAggAAAcAgcTATgAccATTTTccTTgAcgccTccTc-3'  
Position 960856  
3' Primer 193-42  
Sequence 5'-TgTTccgTTgcgcTgcccggATTAcAggAcggATccgcccTTAgTgcTTgATTAc-3'  
Position 962982  

 Linear View (Whole Mode)
View Location
   960.0  –  1010.0 (KBP)

Sequences
Nucleotide
Fasta Format

View sequence out neighbor 100bp
-00100                                             GACAAAACTG GTTTTTGCAC ACAACGTTAA 
-00070 CGATTTGTGG CGTCGGCGCG TATAATGCGC GCGGTTATGT TAACGGTACG CCTGTTTTAA GGAGATAAAG 
000001 ATGACGGCAA TTGCCCCGGT TATTACCATT GATGGCCCAA GCGGTGCAGG GAAAGGCACC TTGTGTAAGG 
000071 CTATGGCGGA AGCGTTGCAA TGGCATCTGC TGGACTCGGG TGCAATTTAT CGCGTACTGG CATTGGCGGC 
000141 ATTACATCAC CATGTTGATG TTGCGTCGGA AGATGCGCTG GTACCGCTGG CATCCCATCT GGATGTACGT 
000211 TTTGTGTCGA CCAATGGCAA TCTGGAAGTG ATCCTCGAAG GGGAAGATGT CAGCGGCGAA ATTCGTACTC 
000281 AGGAAGTGGC GAATGCAGCT TCACAAGTCG CGGCATTCCC ACGCGTTCGT GAAGCATTAT TGCGTCGCCA 
000351 ACGCGCGTTT CGCGAATTAC CAGGTCTGAT TGCCGATGGC CGCGACATGG GAACGGTGGT ATTCCCTGAT 
000421 GCACCAGTGA AAATTTTCCT TGACGCCTCC TCGGAAGAAC GTGCGCATCG CCGCATGCTA CAGTTGCAGG 
000491 AGAAGGGCTT TAGTGTTAAC TTTGAGCGCC TTTTGGCCGA GATCAAAGAA CGCGACGACC GCGATCGTAA 
000561 CCGAGCGGTA GCGCCACTGG TTCCGGCAGC CGATGCTTTA GTGTTGGATT CCACCACCTT AAGCATTGAG 
000631 CAAGTGATTG AAAAAGCGCT ACAATACGCG CGCCAGAAAT TGGCTCTCGC ATAAGCGACC GAATTTGCAG 
000701 TACCCCCGTT GCAATGGAAT GACAGCGGGT ATGTTAAACA ACCCCATCCG GCATGGAGCC AGGTGGACGT 
000771 TAAATATAAA CCTGAAGATT AAACATGACT GAATCTTTTG CTCAACTCTT TGAAGAGTCC TTAAAAGAAA 
000841 TCGAAACCCG CCCGGGTTCT ATCGTTCGTG GCGTTGTTGT TGCTATCGAC AAAGACGTAG TACTGGTTGA 
000911 CGCTGGTCTG AAATCTGAGT CCGCCATCCC GGCTGAGCAG TTCAAAAACG CCCAGGGCGA GCTGGAAATC 
000981 CAGGTAGGTG ACGAAGTTGA CGTTGCTCTG GACGCAGTAG AAGACGGCTT CGGTGAAACT CTGCTGTCCC 
001051 GTGAGAAAGC TAAACGTCAC GAAGCCTGGA TCACGCTGGA AAAAGCTTAC GAAGATGCTG AAACTGTTAC 
001121 CGGTGTTATC AACGGCAAAG TTAAGGGCGG CTTCACTGTT GAGCTGAACG GTATTCGTGC GTTCCTGCCA 
001191 GGTTCTCTGG TAGACGTTCG TCCGGTGCGT GACACTCTGC ACCTGGAAGG CAAAGAGCTT GAATTTAAAG 
001261 TAATCAAGCT GGATCAGAAG CGCAACAACG TTGTTGTTTC TCGTCGTGCC GTTATCGAAT CCGAAAACAG 
001331 CGCAGAGCGC GATCAGCTGC TGGAAAACCT GCAGGAAGGC ATGGAAGTTA AAGGTATCGT TAAGAACCTC 
001401 ACTGACTACG GTGCATTCGT TGATCTGGGC GGCGTTGACG GCCTGCTGCA CATCACTGAC ATGGCCTGGA 
001471 AACGCGTTAA GCATCCGAGC GAAATCGTCA ACGTGGGCGA CGAAATCACT GTTAAAGTGC TGAAGTTCGA 
001541 CCGCGAACGT ACCCGTGTAT CCCTGGGCCT GAAACAGCTG GGCGAAGATC CGTGGGTAGC TATCGCTAAA 
001611 CGTTATCCGG AAGGTACCAA ACTGACTGGT CGCGTGACCA ACCTGACCGA CTACGGCTGC TTCGTTGAAA 
001681 TCGAAGAAGG CGTTGAAGGC CTGGTACACG TTTCCGAAAT GGACTGGACC AACAAAAACA TCCACCCGTC 
001751 CAAAGTTGTT AACGTTGGCG ATGTAGTGGA AGTTATGGTT CTGGATATCG ACGAAGAACG TCGTCGTATC 
001821 TCCCTGGGTC TGAAACAGTG CAAAGCTAAC CCGTGGCAGC AGTTCGCGGA AACCCACAAC AAGGGCGACC 
001891 GTGTTGAAGG TAAAATCAAG TCTATCACTG ACTTCGGTAT CTTCATCGGC TTGGACGGCG GCATCGACGG 
001961 CCTGGTTCAC CTGTCTGACA TCTCCTGGAA CGTTGCAGGC GAAGAAGCAG TTCGTGAATA CAAAAAAGGC 
002031 GACGAAATCG CTGCAGTTGT TCTGCAGGTT GACGCAGAAC GTGAACGTAT CTCCCTGGGC GTTAAACAGC 
002101 TCGCAGAAGA TCCGTTCAAC AACTGGGTTG CTCTGAACAA GAAAGGCGCT ATCGTAACCG GTAAAGTAAC 
002171 TGCAGTTGAC GCTAAAGGCG CAACCGTAGA ACTGGCTGAC GGCGTTGAAG GTTACCTGCG TGCTTCTGAA 
002241 GCATCCCGTG ACCGCGTTGA AGACGCTACC CTGGTTCTGA GCGTTGGCGA CGAAGTTGAA GCTAAATTCA 
002311 CCGGCGTTGA TCGTAAAAAC CGCGCAATCA GCCTGTCTGT TCGTGCGAAA GACGAAGCTG ACGAGAAAGA 
002381 TGCAATCGCA ACTGTTAACA AACAGGAAGA TGCAAACTTC TCCAACAACG CAATGGCTGA AGCTTTCAAA 
002451 GCAGCTAAAG GCGAGTAATT CTCTGACTCT TCGGGATTTT TATTCCGAAG TTTGTTGAGT TTACTTGACA 
002521 GATTGCAGGT TTCGTCCTGT AATCAAGCAC TAAGGGCGGC TACGGCCGCC CTTAATCAAT GCAGCAACAG 
002591 CAGCCGCTTA ATTTGCCTTT AAGGAACCGG AGGAATCATG ACCAAGTCAG AATTGATAGA AAGACTTGCC 
002661 ACCCAGCAAT CGCACATTCC CGCCAAGACG GTTGAAGATG CAGTAAAAGA GATGCTGGAG CATATGGCCT 
002731 CGACTCTTGC GCAGGGCGAG CGTATTGAAA TCCGCGGTTT CGGCAGTTTC TCTTTGCACT ACCGCGCACC 
002801 ACGTACCGGA CGTAATCCGA AGACTGGCGA TAAAGTAGAA CTGGAAGGAA AATACGTTCC TCACTTTAAA 
002871 CCTGGTAAAG AACTGCGCGA TCGCGCCAAT ATTTACGGTT AAGTTTTTTA CTCAAACTTG AACGAGAGAA 
002941 AAGCACCTGT CGGGTGCTTT TTTCATTTCT CTAATCTGGA ACTGGAAGCT GCCTCGCAGA GTTTTGAACA 
003011 GTTTTCACCC TTTCGTTAAA TTCTTCTGAA TATGCCTCGG GGAACGCAAA ATTCCCACCA GACAACCGCT 
003081 CAACAAAGTT GCACACTTTC CATAAACAGG GAGGGGTGCA TGAAAATAAC GACAGTCGGT GTATGCATAA 
003151 TTAGCGGAAT TTTTCCGTTG CTGATTTTGC CCCAATTGCC TGGGACATTA ACCCTTGCGT TTCTGACTCT 
003221 CTTCGCCTGC GTACTGGCAT TTATCCCTGT TAAAACCGTC CGTTATATCG CGCTGACGTT GCTGTTTTTC 
003291 GTTTGGGGCA TATTATCAGC AAAGCAAATT TTGTGGGCAG GAGAAACCTT AACTGGCGCG ACGCAGGATG 
003361 CAATTGTTGA GATCACTGCA ACTGACGGCA TGACCACTCA TTACGGTCAA ATTACTCATC TACAAGGTCG 
003431 ACGTATATTC CCTGCGTCAG GTCTCGTGAT GTATGGCGAA TATCTTCCGC AAGCGGTTTG TGCTGGACAA 
003501 CAATGGTCAA TGAAACTCAA AGTTCGTGCA GTTCATGGCC AACTTAATGA TGGCGGCTTT GATAGCCAGC 
003571 GTTATGCCAT TGCCCAGCAT CAGCCGCTCA CCGGCCGTTT TCTGCAGGCA AGTGTCATTG AACCGAATTG 
003641 TAGCCTGCGT GCACAGTATC TGGCGTCACT ACAAACAACG CTGCAACCCT ATCCGTGGAA TGCGGTTATT 
003711 CTTGGTTTAG GTATGGGGGA ACGGTTATCC GTCCCCAAAG AAATCAAAAA TATCATGCGC GATACTGGAA 
003781 CGGCGCATTT AATGGCGATA TCGGGATTGC ACATCGCTTT TGCGGCGTTG CTGGCTGCCG GACTCATTCG 
003851 CAGTGGACAA ATTTTTCTGC CTGGGCGCTG GATCCACTGG CAAATACCAT TAATTGGCGG AATCTGCTGT 
003921 GCTGCTTTTT ATGCCTGGTT GACGGGAATG CAACCTCCTG CATTGCGTAC CATGGTGGCG CTTGCTACGT 
003991 GGGGAATGCT TAAGTTAAGT GGGCGACAGT GGAGTGGCTG GGATGTATGG ATATGTTGTC TGGCGGCAAT 
004061 TTTGCTGATG GATCCTGTTG CCATTCTCTC GCAAAGTTTA TGGCTCTCTG CCGCTGCGGT CGCGGCATTG 
004131 ATATTTTGGT ATCAGTGGTT TCCCTGTCCT GAGTGGCAAC TGCCGCCGGT ATTGCGTGCA GTTGTTTCCC 
004201 TCATCCATCT GCAACTGGGA ATCACACTTC TGCTTATGCC CGTGCAAATC GTCATATTTC ATGGCATTAG 
004271 TCTGACCTCG TTTATTGCAA ATCTATTAGC AATTCCCTTG GTGACATTTA TCACGGTTCC GTTGATCCTC 
004341 GCCGCGATGG TTGTGCATTT AAGCGGGCCG TTAATCCTGG AGCAAGGGTT ATGGTTTCTT GCCGACCGGT 
004411 CTTTGGCTTT ACTTTTCTGG GGGTTAAAGA GTTTGCCGGA AGGGTGGATC AACATTGCTG AATGTTGGCA 
004481 ATGGCTATCA TTTTCCCCAT GGTTCTTACT GGTGGTATGG CGATTAAACG CCTGGCGAAC GTTGCCAGCA 
004551 ATGTGTGTGG CTGGAGGCTT GCTGATGTGC TGGCCGCTGT GGCAAAAACC TCGACCTGAC GAGTGGCAGC 
004621 TGTACATGCT TGATGTCGGG CAAGGGCTGG CAATGGTGAT AGCCAGAAAC GGCAAAGCGA TTCTCTATGA 
004691 CACAGGACTG GCCTGGCCTG AAGGGGATAG TGGGCAACAA CTGATTATCC CCTGGCTCCA CTGGCATAAT 
004761 CTTGAACCGG AAGGCGTTAT TCTGAGCCAT GAACATCTGG ATCACCGGGG AGGGCTGGAT TCAATATTGC 
004831 ATATATGGCC GATGTTATGG ATCAGAAGTC CGTTAAACTG GGAACATCAT CAGCCCTGTG TGCGTGGCGA 
004901 AGCGTGGCAA TGGCAAGGAT TGCGTTTCAG CGCGCACTGG CCTTTACAAG GTAGCAACGA TAAAGGAAAT 
004971 AACCATTCCT GTGTGGTTAA GGTTGATGAC GGGACGAATA GCATTCTTCT AACCGGTGAT ATTGAAGCCC 
005041 CAGCTGAACA AAAGATGCTA AGCCGTTACT GGCAGCAAGT GCAGGCAACA TTGCTTCAGG TACCTCACCA 
005111 TGGCAGTAAT ACCTCATCAT CGTTGCCATT AATTCAGCGA GTGAATGGAA AAGTGGCACT CGCATCGGCA 
005181 TCGCGCTATA ACGCATGGCG ACTGCCCTCT AACAAAGTTA AGCATCGCTA TCAACTGCAA GGATATCAAT 
005251 GGATTGATAC TCCACATCAA GGTCAAACAA CGGTCAATTT TTCAGCGCAA GGCTGGCGGA TTAGCAGCCT 
005321 CAGGGAGCAA ATTTTACCTC GTTGGTATCA TCAGTGGTTT GGCGTGCCAG TGGATAACGG GTAGAATATG 
005391 CGGCTATTTC AACAAATGCT GGTTTTTTGA ATGCATAACG ACAAAGATCT CTCTACGTGG CAGACATTCC 
005461 GCCGACTGTG GCCAACCATT GCG