MG1655
W3110
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Gene Report : uup
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion OCR55 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  uup
Related strains
     Strains Search Search strains by gene name:  uup   Search strains by all related name:  uup b0949 ECK0940 JW0932 o635 ycbH ycbI

General information  (Go to Linear View:)
 Gene Name uup  
 Alternative name b0949,ECK0940,JW0932,o635,ycbH,ycbI  
 Location, Length 1,009,187 - 1,011,094 (  +  ) ;   21.75 min ; 1908 (bp) ,   635 (aa) Go to Linear View
 Product fused predicted transporter subunits of ABC superfamily: ATP-binding components  
 Operon Name rlmL-uup  
 Note putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm  
 Function putative transport; Not classified  
 Gene Ontology GO:0000166 ; nucleotide binding ( uup )
GO:0005515 ; protein binding ( uup )
GO:0005524 ; ATP binding ( uup )
GO:0006810 ; transport ( uup )
GO:0016887 ; ATPase activity ( uup )
GO:0017111 ; nucleoside-triphosphatase activity ( uup )
 PID 1787182  
 EC number
  (KEGG Pathway)   		 
SWISS-PROT  ( Show details [ 2 more] )
  botton Entry name(Acc.no) UUP_ECOLI ( P43672 ; O05662; P43673; P75865 )
    -  Protein name ABC transporter ATP-binding protein uup.  
    -  Synonyms  
    -  Gene name Name=uup; OrderedLocusNames=b0949;  

 Linear View (Whole Mode)
View Location
   1000.0  –  1025.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP uup (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Rnase-L Inhibitor  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST ABC transporter ATP-binding protein uup  
         PSI-BLAST Putative cobalt import ATP-binding protein cbiO 6
    nr     (database updated : 2007.02.20 )
         BLAST fused predicted transporter subunits of ABC superfamily: ATP-binding components [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    CAMP_PHOSPHO_SITE    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    TYR_PHOSPHO_SITE    MYRISTYL    RGD    ATP_GTP_A    LEUCINE_ZIPPER    ABC_TRANSPORTER     

Other Cross-Reference
    COG COG0488R 
    EcoCyc uup 

MMBR References
J Bacteriol. 1983;153(1):384-9.
New class of mutations in Escherichia coli (uup) that affect precise excision of insertion elements and bacteriophage Mu growth.
Hopkins JD, Clements M, Syvanen M. ( 6294054 )
J Bacteriol. 1997;179:2892-2899
Identification and characterization of ssb and uup mutants with increased frequency of precise excision of transposon Tn10 derivatives: nucleotide sequence of uup in Escherichia coli.
Reddy, M., and J. Gowrishankar.

Sequences
Amino acid
FASTA format 
0001 MSLISMHGAW LSFSDAPLLD NAELHIEDNE RVCLVGRNGA GKSTLMKILN REQGLDDGRI IYEQDLIVAR 
0071 LQQDPPRNVE GSVYDFVAEG IEEQAEYLKR YHDISRLVMN DPSEKNLNEL AKVQEQLDHH NLWQLENRIN 
0141 EVLAQLGLDP NVALSSLSGG WLRKAALGRA LVSNPRVLLL DEPTNHLDIE TIDWLEGFLK TFNGTIIFIS 
0211 HDRSFIRNMA TRIVDLDRGK LVTYPGNYDQ YLLEKEEALR VEELQNAEFD RKLAQEEVWI RQGIKARRTR 
0281 NEGRVRALKA MRRERGERRE VMGTAKMQVE EASRSGKIVF EMEDVCYQVN GKQLVKDFSA QVLRGDKIAL 
0351 IGPNGCGKTT LLKLMLGQLQ ADSGRIHVGT KLEVAYFDQH RAELDPDKTV MDNLAEGKQE VMVNGKPRHV 
0421 LGYLQDFLFH PKRAMTPVRA LSGGERNRLL LARLFLKPSN LLILDEPTND LDVETLELLE ELIDSYQGTV 
0491 LLVSHDRQFV DNTVTECWIF EGGGKIGRYV GGYHDARGQQ EQYVALKQPA VKKTEEAAAA KAETVKRSSS 
0561 KLSYKLQREL EQLPQLLEDL EAKLEALQTQ VADASFFSQP HEQTQKVLAD MAAAEQELEQ AFERWEYLEA 
0631 LKNGG
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             AAGCACAAGA AATTACGCAA AAAACGCTCT 
-070 CCCAGGATTT CGCCCGTAAC CGCCAGATCC ACAACTGCTG GCTGATTACC GCAGCCTGAA AGGAATAGTA 
0001 atgtcattaa tcagtatgca tggcgcatgg ctgtcgttca gcgacgcgcc gcttctcgat aacgcagaac 
0071 tgcatatcga agataacgaa cgtgtttgtc tggtgggccg caacggcgca ggcaaatcga cgttaatgaa 
0141 aatcctcaac cgtgaacaag ggctggatga cggtcgcatt atttacgagc aagatttgat tgtagcgcgt 
0211 ctgcaacagg atccgccgcg taacgttgag ggtagcgttt atgatttcgt tgccgaaggc attgaagaac 
0281 aagcggaata tctgaaacgc tatcacgata tttcgcgcct ggtgatgaac gacccgagcg agaaaaatct 
0351 caacgaactg gcgaaggttc aggaacagct ggatcaccac aacctgtggc agctggaaaa ccgcatcaac 
0421 gaagtgctgg cgcaactggg gttagatcct aacgttgcgc tgtcgtcgct ttccggcggc tggttgcgta 
0491 aagcggcatt aggacgcgcg ctggtgagta atccgcgcgt gctgttgctt gatgaaccga caaaccacct 
0561 ggatattgaa accatcgact ggctggaagg gtttttgaaa actttcaacg ggacgattat tttcatctcc 
0631 cacgaccgtt cgtttatccg caatatggcg acgcgcattg ttgatctcga tcgcggcaag ctggtgacct 
0701 atccagggaa ttacgaccag tacctgctgg aaaaagaaga agccctgcgc gtggaagaat tacaaaatgc 
0771 cgagttcgat cgcaaactgg cgcaggaaga ggtgtggatc cgccagggga tcaaagcacg ccgtacccgt 
0841 aatgaaggcc gcgtacgcgc cctgaaagcg atgcgtcgcg aacgtggtga acgtcgcgaa gtgatgggta 
0911 ccgcaaagat gcaggtggaa gaggccagcc gctccggtaa aatcgttttc gaaatggaag acgtttgcta 
0981 ccaggttaac ggtaagcaac tggtgaaaga tttttctgcc caggttctac gtggcgacaa aattgccctg 
1051 attggtccga atgggtgcgg caaaaccacg ctgctaaaac tgatgctcgg tcagcttcaa gcggacagcg 
1121 ggcgtattca cgttggcacc aaactggaag tggcttattt cgatcagcac cgcgcggaac tggatcccga 
1191 taaaacggtg atggataacc ttgccgaagg taagcaagag gtgatggtta acggcaagcc acgccacgta 
1261 ttgggctatt tgcaggactt tctgttccat ccgaaacggg cgatgacgcc ggtacgtgcg ctttctggcg 
1331 gtgagcggaa ccgcttgctg ctggcgcgtt tgttcctcaa accaagcaac ttattgattc ttgacgaacc 
1401 gaccaacgat cttgatgtcg aaacgctgga actgctggaa gaactgatcg acagctatca gggcacggta 
1471 ttgctggtta gccacgatcg tcagtttgtc gataacaccg ttacagaatg ttggatcttc gaaggcggcg 
1541 gtaaaattgg tcgttatgtc ggcggttatc atgatgcccg tggtcagcaa gagcagtatg tggcgctcaa 
1611 acagcctgcg gtgaaaaaaa ccgaagaagc cgccgcggca aaagcagaaa ctgtaaaacg cagcagtagc 
1681 aaactaagct ataaattgca gcgcgaactg gagcagctac cgcaattgct cgaagatctg gaggcgaagc 
1751 tggaagccct acagacgcaa gtggcggatg cttccttctt cagtcagccg catgagcaga cgcaaaaagt 
1821 gcttgctgat atggctgctg cagagcagga gctggagcaa gcctttgaac gctgggagta tcttgaagcg 
1891 ttaaaaaatg gtggctgaTC GCAAAATAGT CGATTTAAAC AGAGACAGCT GACAACGGTA AAATTGCCTG 
1961 ATGAACTGGG TTTATCAGGC ATGAAAACCA ACACTTTGTT AGTCATCT