|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
15
(LD)
,
15+dps
(LD)
,
OCR48,50-8 (LD 15D::Cm)
(D)
,
OCR49
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
potI
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
potI
Search strains by all related name:
potI b0857 ECK0848 JW0841
|
General information (Go to Linear View: )
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|
Gene Name
|
potI
|
|
Alternative name
|
b0857,ECK0848,JW0841
|
|
Location, Length
|
896,307 - 897,152
(
+
)
;
19.32
min
;
846
(bp) ,
281
(aa)
|
|
Product
|
putrescine transporter subunit: membrane component of ABC superfamily
|
|
Operon Name
|
potFGHI
|
|
Note
|
putrescine transport protein; permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0015847 - putrescine transport
|
|
Function
|
transport; Transport of small molecules: Amino acids, amines
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( potI )
GO:0005886
;
plasma membrane ( potI )
GO:0006810
;
transport ( potI )
GO:0016020
;
membrane ( potI )
GO:0016021
;
integral to membrane ( potI )
|
|
PID
|
1787081
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
POTI_ECOLI
(
P31136
)
|
|
- Protein name
|
Putrescine transport system permease protein potI.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=potI; OrderedLocusNames=b0857, c0990;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
potI
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putrescine transport system permease protein potI
|
|
PSI-BLAST
|
Putrescine transport system permease protein potI
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putrescine transport system permease protein potI [Escherichia coli UTI89]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
GLYCOSAMINOGLYCAN
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
BPD_TRANSP_INN_MEMBR
|
|
MMBR References
|
J Biol Chem. 1993;268:146-152
Characteristics of the operon for a putrescine transport system that maps at 19 minutes on the Escherichia coli chromosome.
Pistocchi, R., K. Kashiwagi, S. Miyamoto, E. Nukui, H. Kobayashi, and K. Igarashi.
|
| Sequences |
Amino acid
FASTA format
|
0001 MNNLPVVRSP WRIVILLLGF TFLYAPMLML VIYSFNSSKL VTVWAGWSTR WYGELLRDDA MMSAVGLSLT
0071 IAACAATAAA ILGTIAAVVL VRFGRFRGSN GFAFMITAPL VMPDVITGLS LLLLFVALAH AIGWPADRGM
0141 LTIWLAHVTF CTAYVAVVIS SRLRELDRSI EEAAMDLGAT PLKVFFVITL PMIMPAIISG WLLAFTLSLD
0211 DLVIASFVSG PGATTLPMLV FSSVRMGVNP EINALATLIL GAVGIVGFIA WYLMARAEKQ RIRDIQRARR
0281 G
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GGCCGGTGGC CTCGGCGGTA GCGATCATCA
-070 TGTTGCTGCT GCTAATTGTG CCGATAATGT GGTTCCACAA ACACCAGCAA AAAAGCGTGG GAGAACACGG
0001 atgaataatt taccggtagt tcgttcgccc tggcggattg tgattttgct gctgggcttt acctttctct
0071 acgcgccaat gctgatgctg gttatctatt cgtttaacag ctcgaagctg gtgacggtgt gggccggctg
0141 gtcaacgcgc tggtatggtg agttattgcg cgatgacgcg atgatgagtg cggttggttt aagtctgaca
0211 attgcggcct gtgcggcgac ggcggcggcg atcctcggaa ctattgcggc ggtggtgctg gtgcgctttg
0281 gcaggtttcg cggatcaaat ggctttgcct ttatgatcac cgcgccgctg gtaatgccag atgtcatcac
0351 gggcttgtcg ctgttgttat tattcgtcgc gcttgctcat gccattggct ggcctgcgga ccgcggtatg
0421 ctcaccatct ggctggcgca tgtcactttt tgtacggctt atgtggcggt cgttatttct tcaagattgc
0491 gggaactgga tcgctcgata gaagaagcag cgatggatct cggtgcgacg ccgctgaaag tgtttttcgt
0561 cattacgcta ccgatgatca tgcccgcgat catttctggc tggttactgg cttttacttt gtcgcttgat
0631 gatctggtga tcgccagctt tgtttccggg ccgggagcca ccacgttacc gatgctggtc ttttccagcg
0701 tgcggatggg ggtgaatccg gaaatcaacg ccctggcaac attgatcctc ggcgcggtcg gaattgtcgg
0771 atttatcgcc tggtatctga tggctcgcgc agaaaaacag cggatacgcg acatccagcg tgcaagacgt
0841 ggctgaAGAC ACTAAAATTT GCCAACCTGG CTACATAATG CCGCGCATGT CGCGGCATTG TTTTCATGGA
0911 AGACGAAACG TTGGGATTTT TTAAGAAAAC ATCTTC
|
