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PEC Original Annotations
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Essentiality
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Class
|
non-essential
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References (PMID)
|
|
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Deletion
|
15
(LD)
,
DE(pgl-grxA)502
,
15+dps
(LD)
,
OCR48,50-8 (LD 15D::Cm)
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
gsiC
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
gsiC
Search strains by all related name:
gsiC b0831 ECK0821 JW0815 o306 o306a yliC
|
General information (Go to Linear View: )
|
|
Gene Name
|
gsiC
|
|
Alternative name
|
b0831,ECK0821,JW0815,o306,o306a,yliC
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|
Location, Length
|
870,190 - 871,110
(
+
)
;
18.76
min
;
921
(bp) ,
306
(aa)
|
|
Product
|
glutathione transporter, permease component, ABC superfamily
|
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Operon Name
|
iaaA-gsiABCD
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Note
|
putative transport system permease protein; GO_component: GO:0019866 - organelle inner membrane
|
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Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( gsiC )
GO:0005886
;
plasma membrane ( gsiC )
GO:0006810
;
transport ( gsiC )
GO:0016020
;
membrane ( gsiC )
GO:0016021
;
integral to membrane ( gsiC )
|
|
PID
|
1787053
|
EC number
(KEGG Pathway)
|
|
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SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
DPPB_ECOLI
(
P37316
)
|
|
- Protein name
|
Dipeptide transport system permease protein dppB.
|
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- Synonyms
|
|
|
- Gene name
|
Name=dppB; OrderedLocusNames=b3543, c4358, z4960, ECs4423;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yliC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Inner membrane ABC transporter permease protein yliC
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PSI-BLAST
|
Inner membrane ABC transporter permease protein yliC
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted peptide transporter subunit: membrane component of ABC superfamily [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
BPD_TRANSP_INN_MEMBR
|
| Sequences |
Amino acid
FASTA format
|
0001 MLNYVIKRLL GLIPTLFIVS VLVFLFVHML PGDPARLIAG PEADAQVIEL VRQQLGLDQP LYHQFWHYIS
0071 NAVQGDFGLS MVSRRPVADE IASRFMPTLW LTITSMVWAV IFGMAAGIIA AVWRNRWPDR LSMTIAVSGI
0141 SFPAFALGML LIQVFSVELG WLPTVGADSW QHYILPSLTL GAAVAAVMAR FTRASFVDVL SEDYMRTARA
0211 KGVSETWVVL KHGLRNAMIP VVTMMGLQFG FLLGGSIVVE KVFNWPGLGR LLVDSVEMRD YPVIQAEILL
0281 FSLEFILINL VVDVLYAAIN PAIRYK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGTCGGCACA CAGTAAAAAC CTGACCGGTT
-070 TTTGGATCAT GCCAGACACC GGCTTCAGCT TTGAAGACGC GGATTTGCAA TAAGCAACGC AGGGAGTGGA
0001 atgcttaatt acgttatcaa acgcttactg gggttgattc cgacgctgtt tatcgtctcg gtgctggtgt
0071 ttttatttgt ccatatgctg cccggcgatc cggcgcgatt gattgccggg cccgaagctg atgcgcaggt
0141 tatagaactg gtgcgtcagc agctggggtt ggatcagccg ctgtatcacc agttctggca ctatatcagc
0211 aatgctgtgc agggggattt tggcctgtcg atggtgtcgc gtcgtccggt tgccgatgag attgccagcc
0281 gctttatgcc aacgctgtgg ctgaccataa ccagtatggt ctgggcggtt atatttggta tggcggcggg
0351 aattatcgcc gccgtctggc gtaaccgttg gccggatcga ttgagtatga ccattgcggt gtcggggatc
0421 tcgtttccgg catttgctct ggggatgctt ttaattcagg tattctccgt tgaactgggc tggctgccta
0491 ccgtgggagc agacagttgg cagcactaca ttttaccctc cctgacgctc ggcgcggcag tggccgccgt
0561 gatggcgcgc tttacccgcg cgtcgtttgt cgatgtttta agcgaagatt atatgcgtac cgcgagggcg
0631 aaaggggtga gcgaaacctg ggttgtcctc aaacacgggc tacgtaacgc gatgatcccg gtagtgacca
0701 tgatgggctt acagtttggc tttttgctcg gtggttccat cgttgtggag aaagttttca actggccggg
0771 acttggacgc ttactcgttg actccgtaga aatgcgtgat tacccggtga ttcaggcgga aattctgctt
0841 ttctcgctgg aatttattct tatcaactta gtggtggatg tgctttacgc cgccattaac ccggctatca
0911 ggtacaagta aGGATGCGAC TATTTAACTG GCGACGTCAG GCGGTGTTAA ACGCCATGCC ACTGGTCAAA
0981 CCTGACCAGG TACGTACACC GTGGCATGAA TTCTGGCGAC G
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