|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
15
(LD)
,
DE(pgl-grxA)502
,
DE(glnP-moeA)454
,
15+dps
(LD)
,
OCR48,50-8 (LD 15D::Cm)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ybiT
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ybiT
Search strains by all related name:
ybiT b0820 ECK0810 JW0804 o530
|
General information (Go to Linear View: )
|
|
Gene Name
|
ybiT
|
|
Alternative name
|
b0820,ECK0810,JW0804,o530
|
|
Location, Length
|
855,186 - 856,778
(
+
)
;
18.43
min
;
1593
(bp) ,
530
(aa)
|
|
Product
|
fused predicted transporter subunits of ABC superfamily: ATP-binding components
|
|
Operon Name
|
ybiT
|
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Note
|
putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0000166
;
nucleotide binding ( ybiT )
GO:0005515
;
protein binding ( ybiT )
GO:0005524
;
ATP binding ( ybiT )
GO:0006810
;
transport ( ybiT )
GO:0016887
;
ATPase activity ( ybiT )
GO:0017111
;
nucleoside-triphosphatase activity ( ybiT )
|
|
PID
|
1787041
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YBIT_ECOLI
(
P75790
)
|
|
- Protein name
|
Hypothetical ABC transporter ATP-binding protein ybiT.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ybiT; OrderedLocusNames=b0820, c0906, z1042, ECs0897;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ybiT
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Rnase-L Inhibitor
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical ABC transporter ATP-binding protein ybiT
|
|
PSI-BLAST
|
Putative cobalt import ATP-binding protein cbiO 7
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative ATP-binding component of a transport system [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
ATP_GTP_A
|
| Sequences |
Amino acid
FASTA format
|
0001 MLVSSNVTMQ FGSKPLFENI SVKFGGGNRY GLIGANGSGK STFMKILGGD LEPTLGNVSL DPNERIGKLR
0071 QDQFAFEEFT VLDTVIMGHK ELWEVKQERD RIYALPEMSE EDGYKVADLE VKYGEMDGYS AEARAGELLL
0141 GVGIPVEQHY GPMSEVAPGW KLRVLLAQAL FADPDILLLD EPTNNLDIDT IRWLEQVLNE RDSTMIIISH
0211 DRHFLNMVCT HMADLDYGEL RVYPGNYDEY MTAATQARER LLADNAKKKA QIAELQSFVS RFSANASKSR
0281 QATSRARQID KIKLEEVKAS SRQNPFIRFE QDKKLFRNAL EVEGLTKGFD NGPLFKNLNL LLEVGEKLAV
0351 LGTNGVGKST LLKTLVGDLQ PDSGTVKWSE NARIGYYAQD HEYEFENDLT VFEWMSQWKQ EGDDEQAVRS
0421 ILGRLLFSQD DIKKPAKVLS GGEKGRMLFG KLMMQKPNIL IMDEPTNHLD MESIESLNMA LELYQGTLIF
0491 VSHDREFVSS LATRILEITP ERVIDFSGNY EDYLRSKGIE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGCCTTTGGC TTGAGTGTAG ACCTTAAGCG
-070 AGGAGCAGGA TCTTCTTTCA GACTTATGGC ATAATGCGCG GTTTGTCATA TCTCTTTTCA GGATACGCCT
0001 gtgttagttt ccagtaacgt caccatgcag ttcggcagta agccgttgtt tgaaaacatt tccgtcaaat
0071 ttggcggcgg caaccgttac ggcctgattg gcgcgaacgg tagtggtaaa tccaccttta tgaagatcct
0141 cggcggcgac cttgagccga cgctgggtaa cgtttccctc gatcccaacg agcgcattgg taaactgcgt
0211 caggatcagt ttgcctttga agagttcact gtgctggata cggtgatcat ggggcataaa gagttgtggg
0281 aagtgaagca ggagcgcgac cgcatctatg ctttgccgga aatgagtgaa gaagacggct ataaagtggc
0351 cgatctggaa gttaaatacg gcgaaatgga cggttactct gcggaagctc gcgccggtga actgttgctt
0421 ggcgtgggaa ttccagtgga acagcactac ggcccgatga gtgaagttgc tcctggctgg aagctgcgtg
0491 tgcttctggc gcaggcgctg tttgctgatc cggatattct cctgctcgac gaaccgacca acaacctcga
0561 catcgacacc attcgctggc tggaacaggt gctgaacgag cgtgacagca ccatgatcat catctcgcac
0631 gaccgtcact tccttaacat ggtctgtacc cacatggcgg atctggatta cggcgagctg cgcgtttatc
0701 cgggtaacta cgatgagtac atgacggcgg cgacccaggc gcgtgaacgt ctgctggccg ataacgccaa
0771 gaagaaagcg cagattgctg agttgcaatc tttcgttagc cgctttagcg ccaacgcctc gaaatctcgc
0841 caggcaactt cgcgcgcgcg ccagattgat aaaatcaaac tggaagaggt gaaagcctcc agccgtcaga
0911 acccgttcat ccgttttgaa caggataaga aactgttccg taacgcgctg gaagtggaag gtctgaccaa
0981 agggtttgat aacggtccgc tgtttaaaaa tctcaacctg ctgctggaag tgggtgaaaa actggcggta
1051 ctgggtacca acggcgtcgg taaatcaacg ctgctgaaaa cgctggtggg cgatctgcaa ccggacagcg
1121 gcaccgtaaa atggtctgag aacgcgcgca ttggttacta tgctcaggac cacgaatatg agtttgaaaa
1191 tgatctgacc gtgttcgaat ggatgagcca gtggaagcag gaaggcgatg acgagcaggc ggtacgcagt
1261 attctcggtc gtttgctgtt cagccaggac gacatcaaaa agccagctaa agtgctttcc ggtggggaaa
1331 aagggcggat gctgtttggt aagttaatga tgcagaagcc gaacattctg atcatggacg aaccgaccaa
1401 ccacctggat atggaatcca ttgagtcgct gaacatggca ctggaactgt atcagggcac gctgatcttt
1471 gtttcacacg accgtgagtt cgtaagctcc ctggcgaccc gcattctgga aatcaccccg gaacgcgtga
1541 tcgactttag cggtaattac gaagattacc tgcgtagtaa agggatcgag taaGTGATTA TCCGTCACCC
1611 CGATACTGTC GGGGTGACGG CGGCTGATGA CAAATGCAAA ATAGCCTGAT GCGCTACGCT TATCAGGCCT
1681 ACGCAGTACC TGC
|
