|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
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References (PMID)
|
|
|
Deletion
|
OCR47-10
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ybeX
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ybeX
Search strains by all related name:
ybeX b0658 corC ECK0650 f292 f292b JW0655
|
General information (Go to Linear View: )
|
|
Gene Name
|
ybeX
|
|
Alternative name
|
b0658,corC,ECK0650,f292,f292b,JW0655
|
|
Location, Length
|
690,129 - 691,007
(
-
)
;
14.87
min
;
879
(bp) ,
292
(aa)
|
|
Product
|
predicteed ion transport
|
|
Operon Name
|
ybeZYX-lnt
|
|
Note
|
putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0000287
;
magnesium ion binding ( corC )
GO:0006810
;
transport ( corC )
GO:0050897
;
cobalt ion binding ( corC )
|
|
PID
|
1786879
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
CORC_ECOLI
(
P77392
)
|
|
- Protein name
|
Magnesium and cobalt efflux protein corC.
|
|
- Synonyms
|
|
|
- Gene name
|
OrderedLocusNames=b0658, c0743, z0807, ECs0696, SF0624, S0646;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ybeX
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Inosine Monophosphate Dehydrogenase
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Magnesium and cobalt efflux protein corC
|
|
PSI-BLAST
|
Magnesium and cobalt efflux protein corC
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative transport protein [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MSDDNSHSSD TISNKKGFFS LLLSQLFHGE PKNRDELLAL IRDSGQNDLI DEDTRDMLEG VMDIADQRVR
0071 DIMIPRSQMI TLKRNQTLDE CLDVIIESAH SRFPVISEDK DHIEGILMAK DLLPFMRSDA EAFSMDKVLR
0141 QAVVVPESKR VDRMLKEFRS QRYHMAIVID EFGGVSGLVT IEDILELIVG EIEDEYDEED DIDFRQLSRH
0211 TWTVRALASI EDFNEAFGTH FSDEEVDTIG GLVMQAFGHL PARGETIDID GYQFKVAMAD SRRIIQVHVK
0281 IPDDSPQPKL DE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 agaaagaata atttgccagg catttgactg
-070 gcagacgtcc ccgccgttgg tgattaacga cggcgttttg attaactaac atgagaaccc atacgacgcc
0001 atgagcgacg acaattcaca cagtagtgac acgataagca acaagaaggg atttttctcc ctgttactca
0071 gccaactttt ccacggtgaa ccgaaaaacc gtgacgaact gctggcgctg atccgtgatt ccgggcagaa
0141 cgaccttatc gacgaagata cgcgcgatat gctcgaaggg gtgatggaca tcgcagacca acgcgttcgc
0211 gacatcatga tcccccgctc ccagatgatt accctgaaac gcaaccagac gctggacgaa tgtcttgatg
0281 tcatcatcga gtccgcccac tcacgtttcc cggtgattag cgaagacaaa gatcacattg aagggattct
0351 gatggcgaaa gacttgctgc cgtttatgcg cagcgatgct gaagccttca gcatggacaa agtgttacgt
0421 caggcggttg tcgttcctga aagtaagcgc gtagaccgga tgctgaaaga gtttcgctct cagcgttacc
0491 acatggcgat cgttattgac gaattcggtg gggtttccgg tctggtgacc attgaagaca tcctggaact
0561 gattgttggt gagattgaag acgagtatga cgaagaagat gatatcgact tccgtcagct gagtcgtcat
0631 acctggaccg tacgcgcact ggcttccatt gaagacttca acgaagcgtt cggcacccac tttagcgatg
0701 aagaagtcga cactatcggt ggtctggtga tgcaggcatt tgggcatctt ccggcgcgtg gcgaaactat
0771 cgacatcgac ggttaccagt tcaaagtggc gatggccgac agtcggcgta ttattcaggt tcatgtcaaa
0841 atcccggatg actcacccca gccgaagctg gatgaataaa accgaaactg gatagataac tacatggctt
0911 ttgcctcatt aattgaacgc cagcgcattc gcctgctgct ggcgttatta ttcggtgcct gcggaacgc
|
