|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
28
(LD)
,
OCR42,43-3 (LD 28B_CRS)
(D)
,
OCR42,43-4 (LD 28B_P/O)
(D)
,
OCR43
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
allB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
allB
Search strains by all related name:
allB b0512 ECK0505 glxB3 JW0500 o453 o453b ybbX
|
General information (Go to Linear View: )
|
|
Gene Name
|
allB
|
|
Alternative name
|
b0512,ECK0505,glxB3,JW0500,o453,o453b,ybbX
|
|
Location, Length
|
538,371 - 539,732
(
+
)
;
11.60
min
;
1362
(bp) ,
453
(aa)
|
|
Product
|
allantoinase
|
|
Operon Name
|
gcl-hyi-glxR-ybbVW-allB-ybbY-glxK
|
|
Note
|
GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0009442 - allantoin assimilation pathway
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0004038
;
allantoinase activity ( allB )
GO:0006144
;
purine base metabolic process ( allB )
GO:0008270
;
zinc ion binding ( allB )
GO:0016787
;
hydrolase activity ( allB )
GO:0016810
;
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds ( allB )
GO:0046872
;
metal ion binding ( allB )
|
|
PID
|
1786722
|
EC number
(KEGG Pathway)
|
3.5.2.5
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
ALN_ECOLI
(
P77671
)
|
|
- Protein name
|
Allantoinase
|
|
- Synonyms
|
EC 3.5.2.5
|
|
- Gene name
|
Name=allB; Synonyms=glxB3; OrderedLocusNames=b0512;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
allB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of D-Hydantoinase
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Allantoinase
|
|
PSI-BLAST
|
Allantoinase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
allantoinase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CK2_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
RGD
ABC_TRANSPORTER
|
| Sequences |
Amino acid
FASTA format
|
0001 MSFDLIIKNG TVILENEARV VDIAVKGGKI AAIGQDLGDA KEVMDASGLV VSPGMVDAHT HISEPGRSHW
0071 EGYETGTRAA AKGGITTMIE MPLNQLPATV DRASIELKFD AAKGKLTIDA AQLGGLVSYN IDRLHELDEV
0141 GVVGFKCFVA TCGDRGIDND FRDVNDWQFF KGAQKLGELG QPVLVHCENA LICDELGEEA KREGRVTAHD
0211 YVASRPVFTE VEAIRRVLYL AKVAGCRLHV CHVSSPEGVE EVTRARQEGQ DVTCESCPHY FVLDTDQFEE
0281 IGTLAKCSPP IRDLENQKGM WEKLFNGEID CLVSDHSPCP PEMKAGNIMK AWGGIAGLQS CMDVMFDEAV
0351 QKRGMSLPMF GKLMATNAAD IFGLQQKGRI APGKDADFVF IQPNSSYVLT NDDLEYRHKV SPYVGRTIGA
0421 RITKTILRGD VIYDIEQGFP VAPKGQFILK HQQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CAACAGCAGA AAAAACAGGA GAGCAAAAAA
-070 CCATAGGTTA ATTAATCCCG ATATTGAACA TTGAGTTAAA AACCAATCTG TATTTTACAA GGAGTTTGTT
0001 atgtcttttg atttaatcat taaaaacggc accgttattt tagaaaacga agctcgcgtt gtagatatcg
0071 ccgttaaagg cggaaaaatt gctgctatcg gtcaggatct gggcgatgca aaagaagtta tggatgcgtc
0141 tggtctggtg gtttcgccgg gcatggttga tgcgcacacc catatttctg aaccgggtcg tagccactgg
0211 gaaggttatg aaaccggtac tcgcgcagcg gcaaaaggtg gtatcaccac catgatcgaa atgccgctca
0281 accagctgcc tgcaacggtt gaccgcgctt caattgaact gaagttcgat gccgctaaag gcaagctgac
0351 tattgatgcg gcacaactcg gtggcctggt gtcttacaac atcgaccgtc tgcatgagct ggatgaagtg
0421 ggcgttgtcg gcttcaaatg cttcgttgcg acctgtggcg atcgcggtat cgacaacgac ttccgtgatg
0491 taaacgactg gcagttcttc aaaggtgcgc agaagctggg cgaactgggt cagccggtgc tggtgcactg
0561 cgaaaacgcg ctgatttgtg acgaactggg cgaagaagcg aagcgtgaag gtcgcgtaac cgctcatgac
0631 tatgtggctt cgcgtccggt atttaccgaa gtggaagcaa ttcgccgcgt actgtatctg gcgaaagttg
0701 ctggttgccg tctgcacgtt tgccacgtca gcagcccgga aggtgttgag gaagtgactc gtgcacgtca
0771 ggaaggtcag gacgttactt gtgaatcctg cccgcattac tttgtactgg ataccgatca gttcgaagaa
0841 atcggtactc tggcgaagtg ttcaccgccg atccgcgatc tggaaaacca gaaaggcatg tgggaaaaac
0911 tgtttaacgg tgaaatcgac tgcctggttt ccgaccactc tccatgcccg ccggaaatga aagccggtaa
0981 catcatgaaa gcatggggcg gtatcgccgg tctgcaaagc tgcatggacg tgatgttcga tgaagcggta
1051 cagaaacgcg gtatgtctct gccaatgttc ggcaaattaa tggcgactaa cgcagcagat attttcggtc
1121 tgcagcaaaa aggccgtatc gccccaggaa aagatgccga cttcgtcttc attcagccga atagcagcta
1191 tgttcttacc aatgacgatc tggaatatcg ccacaaagtc agcccgtatg ttggccgtac cattggcgcg
1261 cgtatcacga aaaccatctt acgtggtgat gtgatttacg acattgaaca gggcttccct gttgcgccga
1331 aaggtcaatt tatccttaaa catcagcagt aaTCTGGCCC CTGCAATGCC CGTCCTTGCG GCGGGCATTC
1401 TCCGGTTAAG GTGTGTTTAT GTTCAATTTT GCAGTCAGCC GCGAAAGCCT GTTATCAGGA TT
|
