|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
J Bacteriol. 1989;171(5):2626-33.
Nucleotide sequences of the fecBCDE genes and locations of the proteins suggest a periplasmic-binding-protein-dependent transport mechanism for iron(III) dicitrate in Escherichia coli.
Staudenmaier H, Van Hove B, Yaraghi Z, Braun V.
(
2651410
)
|
|
|
Deletion
|
1
(LD)
,
OCR20,24-1 (LD 1-1_CRS)
(D)
,
OCR20,24-2 (LD 1-1_P/O)
(D)
,
OCR21
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
fecD
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
fecD
Search strains by all related name:
fecD b4288 ECK4278 JW4248
|
General information (Go to Linear View: )
|
|
Gene Name
|
fecD
|
|
Alternative name
|
b4288,ECK4278,JW4248
|
|
Location, Length
|
4,509,481 - 4,510,437
(
-
)
;
97.19
min
;
957
(bp) ,
318
(aa)
|
|
Product
|
KpLE2 phage-like element; iron-dicitrate transporter subunit
|
|
Operon Name
|
fecABCDE
|
|
Note
|
citrate-dependent iron transport, membrane-bound protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
|
|
Function
|
transport; Transport of small molecules: Cations
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( fecD )
GO:0005506
;
iron ion binding ( fecD )
GO:0005886
;
plasma membrane ( fecD )
GO:0006810
;
transport ( fecD )
GO:0006811
;
ion transport ( fecD )
GO:0006826
;
iron ion transport ( fecD )
GO:0016020
;
membrane ( fecD )
GO:0016021
;
integral to membrane ( fecD )
|
|
PID
|
1790740
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
FECD_ECOLI
(
P15029
)
|
|
- Protein name
|
Iron(III) dicitrate transport system permease protein fecD.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=fecD; OrderedLocusNames=b4288;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
fecD
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, An Inward-Facing Conformation Of A Putative Metal-Chelate Type Abc Transporter.
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Iron
|
|
PSI-BLAST
|
Iron
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
KpLE2 phage-like element; iron-dicitrate transporter subunit [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
|
|
MMBR References
|
J Bacteriol. 1988;170(6):2716-24.
Genetics of the iron dicitrate transport system of Escherichia coli.
Pressler U, Staudenmaier H, Zimmermann L, Braun V.
(
2836368
)
|
J Bacteriol. 1989;171(5):2626-33.
Nucleotide sequences of the fecBCDE genes and locations of the proteins suggest a periplasmic-binding-protein-dependent transport mechanism for iron(III) dicitrate in Escherichia coli.
Staudenmaier H, Van Hove B, Yaraghi Z, Braun V.
(
2651410
)
|
J Bacteriol. 1990;172(12):6749-58.
Novel two-component transmembrane transcription control: regulation of iron dicitrate transport in Escherichia coli K-12.
Van Hove B, Staudenmaier H, Braun V.
(
2254251
)
|
J Bacteriol. 1992;174(11):3838-9.
Localization of the entire fec region at 97.3 minutes on the Escherichia coli K-12 chromosome.
Veitinger S, Braun V.
(
1592838
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MKIALVIFIT LALAGCALLS LHMGVIPVPW RALLTDWQAG HEHYYVLMEY RLPRLLLALF VGAALAVAGV
0071 LIQGIVRNPL ASPDILGVNH AASLASVGAL LLMPSLPVMV LPLLAFAGGM AGLILLKMLA KTHQPMKLAL
0141 TGVALSACWA SLTDYLMLSR PQDVNNALLW LTGSLWGRDW SFVKIAIPLM ILFLPLSLSF CRDLDLLALG
0211 DARATTLGVS VPHTRFWALL LAVAMTSTGV AACGPISFIG LVVPHMMRSI TGGRHRRLLP VSALTGALLL
0281 VVADLLARII HPPLELPVGV LTAIIGAPWF VWLLVRMR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tactcgcacg cgcgctggcc ttccccggag
-070 atctgcccgc aggcgcagtg ctggcgctga ttggcagccc ttgctttgtc tggcttgtga ggaggcgagg
0001 atgaaaattg cgctggttat tttcatcacc cttgccctgg cgggctgtgc gctgttatca ctccatatgg
0071 gagtgatccc cgtgccgtgg cgcgcgctgc tgaccgactg gcaggccgga cacgagcatt attatgtatt
0141 gatggagtac cgactgccgc gcttgctgct ggcactgttt gtcggtgcag ccctcgccgt ggcgggcgtg
0211 ctgatacagg ggattgtgcg caaccctctg gcatcaccgg atattctcgg tgttaaccat gccgccagcc
0281 tggcctctgt gggggctcta cttcttatgc cgtcactgcc cgtgatggtg ctgccgctgc tggcctttgc
0351 gggcggcatg gcggggttga tattgctgaa gatgctggca aagacccacc agccgatgaa gctggcgctc
0421 accggcgtgg cgctttctgc atgctgggcc agcctgacgg attatctgat gctctcgcgc ccgcaggatg
0491 tgaacaacgc cctgctgtgg ctgaccggca gcttatgggg ccgtgactgg agctttgtga agattgccat
0561 cccgctgatg attttatttc tgccgctgag cctgagtttt tgccgcgatc tcgacctcct tgcactcggc
0631 gatgcgcgcg ccaccacgct cggtgtgtcg gtgccccata cccgattctg ggctttgtta ctagctgtcg
0701 ccatgacatc taccggcgtg gccgcctgcg gcccgattag ctttattggt ctcgtggtgc cgcatatgat
0771 gcgtagcatc accggtggac gtcaccgcag actgctgcct gtttcggccc tgacaggtgc gttgctgttg
0841 gtggttgccg atctgctggc gagaattatt catcccccac tggagctccc ggttggcgtg ctgaccgcca
0911 ttatcggtgc gccgtggttt gtctggttgc ttgtgagaat gcgataaatg actttacgaa ctgaaaatct
0981 gacggtcagt tacgggacag acaaggtact taacgacgtt tcactctcac tgccaacggg gaagatcacc
1051 gccctga
|
