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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
|
OCR19
(D)
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|
Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
bdcA
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
bdcA
Search strains by all related name:
bdcA b4249 ECK4243 f237 JW4207 yjgI
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General information (Go to Linear View: )
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Gene Name
|
bdcA
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|
Alternative name
|
b4249,ECK4243,f237,JW4207,yjgI
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|
Location, Length
|
4,471,363 - 4,472,076
(
-
)
;
96.37
min
;
714
(bp) ,
237
(aa)
|
|
Product
|
c-di-GMP-binding biofilm dispersal mediator protein
|
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Operon Name
|
yjgI
|
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Note
|
putative oxidoreductase
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Function
|
regulator; Not classified
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Gene Ontology
|
GO:0003824
;
catalytic activity ( yjgI )
GO:0005488
;
binding ( yjgI )
GO:0005515
;
protein binding ( yjgI )
GO:0008152
;
metabolic process ( yjgI )
GO:0016491
;
oxidoreductase activity ( yjgI )
|
|
PID
|
2367365
|
EC number
(KEGG Pathway)
|
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SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YJGI_ECOLI
(
P39333
)
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- Protein name
|
Hypothetical oxidoreductase yjgI
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- Synonyms
|
EC 1.-.-.-
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- Gene name
|
Name=yjgI; OrderedLocusNames=b4249;
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Homology Analysis
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BLAST
|
|
Bacteria
|
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GTOP
|
yjgI
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
Chain A, Crystal Structure Of Gluconate 5-Dehydrogenase (Tm0441) From Thermotoga Maritima At 2.07 A Resolution
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
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BLAST
|
Hypothetical oxidoreductase yjgI
|
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PSI-BLAST
|
3-oxoacyl-[acyl-carrier-protein] reductase
|
|
nr
(database updated :
2007.02.20
)
|
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BLAST
|
ORF_f261a [Escherichia coli]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
MYRISTYL
ADH_SHORT
|
| Sequences |
Amino acid
FASTA format
|
0001 MGAFTGKTVL ILGGSRGIGA AIVRRFVTDG ANVRFTYAGS KDAAKRLAQE TGATAVFTDS ADRDAVIDVV
0071 RKSGALDILV VNAGIGVFGE ALELNADDID RLFKINIHAP YHASVEAARQ MPEGGRILII GSVNGDRMPV
0141 AGMAAYAASK SALQGMARGL ARDFGPRGIT INVVQPGPID TDANPANGPM RDMLHSLMAI KRHGQPEEVA
0211 GMVAWLAGPE ASFVTGAMHT IDGAFGA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tggaacgcga gattgttttt tagtgaccat
-070 tacaaaacct gttgacagaa agttaaaaca gttttgtaat gcatgttaca taataaatca aggagtcctt
0001 atgggcgctt ttacaggtaa gacagttctc atcctcggtg gcagtcgtgg tatcggtgcc gctatcgtac
0071 gtcgtttcgt caccgatggg gccaatgtac gattcaccta tgcggggtcg aaagatgccg ctaaacgcct
0141 ggcacaagag actggagcga cagcagtatt cacagatagt gctgacagag acgctgtcat tgatgtcgtt
0211 cgtaagagcg gcgcattgga tatcctggtg gtaaatgcag gtattggcgt ctttggcgag gccctggaat
0281 taaatgccga cgatattgat cgccttttca aaatcaatat tcatgctcct tatcatgcct ctgttgaagc
0351 cgcccggcag atgcccgaag gcgggcgcat cttaatcatc ggctccgtga atggcgatcg tatgcctgtt
0421 gcaggcatgg ctgcttatgc cgccagcaaa tctgccctgc aaggcatggc gcgcgggctg gcccgtgatt
0491 ttggaccgcg tgggatcacc attaacgtcg tccagccagg gccaattgat accgacgcta atcccgccaa
0561 cgggccaatg cgcgatatgt tgcatagttt gatggctatc aaaagacatg ggcaaccgga agaggtcgct
0631 ggtatggtcg catggttagc agggccagaa gccagttttg ttaccggcgc gatgcatacc attgatggcg
0701 cgtttggcgc ataaccgact acgctcaatt aagcccagcc attatccatg atgtctgggt tttgtttact
0771 cacgtcgtcc gctaaaagcg gctcccggta aagagaaatc ttct
|
