MG1655
W3110
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Gene Report : ytfR
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion OCR18 (D)  ,  OCR18-2 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  ytfR
Related strains
     Strains Search Search strains by gene name:  ytfR   Search strains by all related name:  ytfR b4228 b4229 b4485 ECK4224 JW5752 o417a o90b ytfS

General information  (Go to Linear View:)
 Gene Name ytfR  
 Alternative name b4228,b4229,b4485,ECK4224,JW5752,o417a,o90b,ytfS  
 Location, Length 4,449,081 - 4,450,583 (  +  ) ;   95.89 min ; 1503 (bp) ,   500 (aa) Go to Linear View
 Product putative sugar transporter subunit: ATP-binding component of ABC superfamily  
 Operon Name ytfQRT-yjfF  
 Note putative sugar transport protein (ABC superfamily, atp_bind); GO_component: GO:0005737 - cytoplasm  
 Function putative transport; Not classified,4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP bindi  
 Gene Ontology GO:0000166 ; nucleotide binding ( ytfR )
GO:0005524 ; ATP binding ( ytfR )
GO:0006810 ; transport ( ytfR )
GO:0016887 ; ATPase activity ( ytfR )
GO:0017111 ; nucleoside-triphosphatase activity ( ytfR )
 PID 48995001  
 EC number
  (KEGG Pathway)   		 
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) YTFR_ECOLI ( P39326 ; P39327 )
    -  Protein name Hypothetical ABC transporter ATP-binding protein ytfR.  
    -  Synonyms  
    -  Gene name Name=ytfR; OrderedLocusNames=b4228/b4229, z5839, ECs5206;  

 Linear View (Whole Mode)
View Location
   4440.0  –  4465.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP ytfR (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Rnase-L Inhibitor  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Hypothetical ABC transporter ATP-binding protein ytfR  
         PSI-BLAST Ribose import ATP-binding protein rbsA
    nr     (database updated : 2007.02.20 )
         BLAST predicted sugar transporter subunit: ATP-binding component of ABC superfamily [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    CAMP_PHOSPHO_SITE    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    AMIDATION    ATP_GTP_A    LEUCINE_ZIPPER     

Other Cross-Reference
    COG COG1129G 
    EcoCyc ytfR 

Sequences
Amino acid
FASTA format 
0001 MTTDQHQEIL RTEGLSKFFP GVKALDNVDF SLRRGEIMAL LGENGAGKST LIKALTGVYH ADRGTIWLEG 
0071 QAISPKNTAH AQQLGIGTVY QEVNLLPNMS VADNLFIGRE PKRFGLLRRK EMEKRATELM ASYGFSLDVR 
0141 EPLNRFSVAM QQIVAICRAI DLSAKVLILD EPTASLDTQE VELLFDLMRQ LRDRGVSLIF VTHFLDQVYQ 
0211 VSDRITVLRN GSFVGCRETC ELPQIELVKM MLGRELDTHA LQRAGRTLLS DKPVAAFKNY GKKGTIAPFD 
0281 LEVRPGEIVG LAGLLGSGRT ETAEVIFGIK PADSGTALIK GKPQNLRSPH QASVLGIGFC PEDRKTDGII 
0351 AAASVRENII LALQAQRGWL RPISRKEQQE IAERFIRQLG IRTPSTEQPI EFLSGGNQQK VLLSRWLLTR 
0421 PQFLILDEPT RGIDVGAHAE IIRLIETLCA DGLALLVISS ELEELVGYAD RVIIMRDRKQ VAEIPLAELS 
0491 VPAIMNAIAA
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             GCGCTCGCGC CGCATCCGGC GATGGTGCAC 
-070 TGAAGCCTGA TGCGACGCTT ACCGCGTCTT ATCATGCCTA CTGGGAGCAC GCTTTACACC GGGGGAAACC 
0001 atgacgaccg accaacacca ggagatcctc cgcaccgaag gattaagtaa atttttcccc ggcgtcaaag 
0071 cgttagacaa cgttgatttc agcctgcgcc gtggcgaaat catggcgctg ctcggtgaaa acggggcggg 
0141 aaaatcaacg ctaatcaaag cattaactgg tgtataccac gccgatcgcg gcaccatctg gctggaaggc 
0211 caggctatct caccgaaaaa taccgcccac gcgcaacaac tcggcattgg caccgtctat caggaagtca 
0281 acctgctacc caatatgtcg gtcgctgata atctatttat aggccgcgaa cccaaacgct tcggccttct 
0351 acgccgcaaa gagatggaaa agcgcgccac cgaactgatg gcatcttacg gtttctccct cgacgtgcgc 
0421 gaaccgctca accgcttttc agtcgcgatg cagcaaatcg tcgctatttg tcgggctatc gatctctctg 
0491 ccaaagtgct gatcctcgat gaacccaccg ccagtctcga cacccaggaa gtggagttac tgtttgacct 
0561 gatgcgtcag ttgcgcgatc gcggcgtcag cctgattttt gtcactcact ttctcgatca ggtctatcag 
0631 gtcagcgatc ggatcaccgt cttacgcaac ggcagtttcg taggctgtcg ggaaacgtgc gagctaccgc 
0701 agatcgaact ggtaaaaatg atgctggggc gcgagctgga tacccacgcg ctacagcgtg ccgggcgaac 
0771 attgttgagc gacaaacccg ttgccgcgtt caaaaattac ggcaaaaaag gaacgatcgc accgtttgat 
0841 ctcgaagtac gccccggcga gatcgtcggt ctggctggat tgctgggatc aggacgtacc gaaaccgccg 
0911 aagtgatctt cggtatcaaa cctgctgaca gcggcacggc gttgatcaaa ggcaaaccgc aaaacctgcg 
0981 atcgccacat caggcttcgg tactgggcat tggcttctgc ccggaagaca ggaaaaccga tggcatcatc 
1051 gctgccgcct cggtgcggga aaatatcatc ctcgctctcc aggcccagcg cggctggcta cgtcccattt 
1121 cccgcaaaga acagcaagag attgccgaac gctttatccg ccagcttggc attcgcacac cttcaactga 
1191 acaaccgatt gaatttctct ccggcggcaa tcagcaaaaa gtgttgcttt cacgttggct actgacccga 
1261 ccgcaatttc tgatcctcga tgagccaacc cgcggcattg atgttggtgc ccacgccgag atcatccgcc 
1331 tgattgaaac gctatgcgcc gatggtctgg cgctgctggt gatctcctcc gaactggaag agctggtggg 
1401 ctatgccgat cgggtgatta tcatgcgcga tcgcaaacag gtggcggaga tcccgctggc agagctttcc 
1471 gttccggcga tcatgaacgc cattgcggcg taaGGAGAAC AGTGTGATGC CTCAATCTCT TCCGGACACC 
1541 ACTACGCCAA AAAGGCGCTT TCGCTGGCCG ACGGGGATGC CGCAGCTGGT AGCACTATTG CTG