|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK.
(
9729611
)
|
|
|
Deletion
|
4
(LD)
,
OCR13,15-3 (LD 4E_CRS)
(D)
,
OCR13,15-4 (LD 4E_P/O)
(D)
,
OCR14
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
phnK
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
phnK
Search strains by all related name:
phnK b4097 ECK4090 f252 JW5727
|
General information (Go to Linear View: )
|
|
Gene Name
|
phnK
|
|
Alternative name
|
b4097,ECK4090,f252,JW5727
|
|
Location, Length
|
4,316,029 - 4,316,787
(
-
)
;
93.02
min
;
759
(bp) ,
252
(aa)
|
|
Product
|
carbon-phosphorus lyase complex subunit, putative ATP transporter ATP-binding protein
|
|
Operon Name
|
phnCDEEFGHIJKLMNOP
|
|
Note
|
ATP-binding component of phosphonate transport; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006793 - phosphorus metabolic process
|
|
Function
|
enzyme; Central intermediary metabolism: Phosphorus compounds
|
|
Gene Ontology
|
GO:0000166
;
nucleotide binding ( phnK )
GO:0005524
;
ATP binding ( phnK )
GO:0006810
;
transport ( phnK )
GO:0015716
;
phosphonate transport ( phnK )
GO:0015833
;
peptide transport ( phnK )
GO:0016887
;
ATPase activity ( phnK )
GO:0017111
;
nucleoside-triphosphatase activity ( phnK )
|
|
PID
|
48994997
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
PHNK_ECOLI
(
P16678
)
|
|
- Protein name
|
Phosphonates transport ATP-binding protein phnK.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=phnK; OrderedLocusNames=b4097;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
phnK
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain 1, Malk
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Phosphonates transport ATP-binding protein phnK
|
|
PSI-BLAST
|
Phosphate import ATP-binding protein pstB
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
carbon-phosphorus lyase complex subunit [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
GLYCOSAMINOGLYCAN
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
ATP_GTP_A
ABC_TRANSPORTER
|
|
MMBR References
|
J Bacteriol. 1991;173(8):2665-72.
Molecular analysis of the cryptic and functional phn operons for phosphonate use in Escherichia coli K-12.
Makino K, Kim SK, Shinagawa H, Amemura M, Nakata A.
(
1840580
)
|
J Bacteriol. 1991;173(2):587-600.
Involvement of the Escherichia coli phn (psiD) gene cluster in assimilation of phosphorus in the form of phosphonates, phosphite, Pi esters, and Pi.
Metcalf WW, Wanner BL.
(
1846145
)
|
J Bacteriol. 1993;175:3430-3442
Mutational analysis of an Escherichia coli fourteen-gene operon for phosphonate degradation, using TnphoA' elements.
Metcalf, W. W., and B. L. Wanner.
|
FEMS Microbiol Lett. 1992;79(1-3):133-9.
Molecular genetic studies of a 10.9-kb operon in Escherichia coli for phosphonate uptake and biodegradation.
Wanner BL, Metcalf WW.
(
1335942
)
|
J Biol Chem. 1990;265:4461-4471
Molecular biology of carbon-phosphorus bond cleavage. Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli B.
Chen, C. M., Q. Z. Ye, Z. M. Zhu, B. L. Wanner, and C. T. Walsh.
|
| Sequences |
Amino acid
FASTA format
|
0001 MNQPLLSVNN LTHLYAPGKG FSDVSFDLWP GEVLGIVGES GSGKTTLLKS ISARLTPQQG EIHYENRSLY
0071 AMSEADRRRL LRTEWGVVHQ HPLDGLRRQV SAGGNIGERL MATGARHYGD IRATAQKWLE EVEIPANRID
0141 DLPTTFSGGM QQRLQIARNL VTHPKLVFMD EPTGGLDVSV QARLLDLLRG LVVELNLAVV IVTHDLGVAR
0211 LLADRLLVMK QGQVVESGLT DRVLDDPHHP YTQLLVSSVL QN
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 acagctatct tgatgaagtg gtgctggatg
-070 acgccggaaa ccgcatgttt gtctgctccg ataccgatta ttgccgccaa cagagcgagg caaaaaacca
0001 atgaatcaac cgttactttc ggtcaataac ctgacccacc tttacgcgcc gggcaaaggc tttagcgatg
0071 tctcttttga tttatggccg ggggaagtgc tgggcattgt cggggaatcc ggctccggga agaccacgct
0141 gctgaagtcg atctccgcgc gcctgacgcc gcagcagggg gaaattcact acgagaaccg ttcgctgtat
0211 gcaatgagcg aggccgaccg ccgtcgcctg ctgcgtaccg aatggggcgt ggtgcatcag catccactcg
0281 acggcctgcg ccgccaggtg tcggcaggcg gcaatatcgg cgagcggctg atggcgaccg gggcacgtca
0351 ttacggcgat attcgtgcca ccgcgcagaa gtggctggaa gaggtggaga ttcccgccaa ccggatcgac
0421 gacctgccga ccaccttttc cggcggtatg cagcagcgtt tgcagattgc ccgcaacctg gtgacgcatc
0491 cgaagctggt gtttatggat gaaccgaccg gcgggctgga tgtgtcggtg caggcccgcc tgctcgacct
0561 gctgcgcggc ctggtggtgg agctgaacct cgcggtggtg attgtcaccc atgatttagg cgtcgcccgc
0631 ctgctggcgg accgtttgct ggtgatgaag caggggcaag tggtggagag tgggttaacc gaccgcgtgc
0701 tcgacgaccc gcatcatccg tatacacagc tgctggtgtc atcggttttg cagaattgag ccggtgccgg
0771 atgcggcgta aacgccttat ccggcctaca aatgcgctcc ccgtaggtcg gataagacgc gtcagcgtcg
0841 catccgacac ccgaaccac
|
