|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
J Bacteriol. 1991;173(1):234-44.
Identification and characterization of dppA, an Escherichia coli gene encoding a periplasmic dipeptide transport protein.
Olson ER, Dunyak DS, Jurss LM, Poorman RA.
(
1702779
)
|
|
|
Deletion
|
2-1
(LD)
,
OCL10,16-3 (LD 2-1'_CRS)
(D)
,
OCL10,16-4 (LD 2-1'_P/O)
(D)
,
OCL13
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
dppB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
dppB
Search strains by all related name:
dppB b3543 ECK3530 f339 JW3512
|
General information (Go to Linear View: )
|
|
Gene Name
|
dppB
|
|
Alternative name
|
b3543,ECK3530,f339,JW3512
|
|
Location, Length
|
3,702,794 - 3,703,813
(
-
)
;
79.81
min
;
1020
(bp) ,
339
(aa)
|
|
Product
|
dipeptide/heme transporter
|
|
Operon Name
|
dppABCDF
|
|
Note
|
dipeptide transport system permease protein 1; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
|
|
Function
|
transport; Protein, peptide secretion
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( dppB )
GO:0005886
;
plasma membrane ( dppB )
GO:0006810
;
transport ( dppB )
GO:0006857
;
oligopeptide transport ( dppB )
GO:0015031
;
protein transport ( dppB )
GO:0015198
;
oligopeptide transporter activity ( dppB )
GO:0016020
;
membrane ( dppB )
GO:0016021
;
integral to membrane ( dppB )
|
|
PID
|
1789965
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
DPPB_ECOLI
(
P37316
)
|
|
- Protein name
|
Dipeptide transport system permease protein dppB.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=dppB; OrderedLocusNames=b3543, c4358, z4960, ECs4423;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
dppB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Dipeptide transport system permease protein dppB
|
|
PSI-BLAST
|
Dipeptide transport system permease protein dppB
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
dipeptide transport system permease protein 1 [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
BPD_TRANSP_INN_MEMBR
|
|
MMBR References
|
Mol Microbiol. 1991;5(5):1035-47.
Peptide transport and chemotaxis in Escherichia coli and Salmonella typhimurium: characterization of the dipeptide permease (Dpp) and the dipeptide-binding protein.
Abouhamad WN, Manson M, Gibson MM, Higgins CF.
(
1956284
)
|
FEMS Microbiol Lett. 1992;79(1-3):183-90.
Expression of periplasmic binding proteins for peptide transport is subject to negative regulation by phosphate limitation in Escherichia coli.
Smith MW, Payne JW.
(
1478454
)
|
J Bacteriol. 1993;175:1452-1456
The periplasmic dipeptide permease system transports 5-aminolevulinic acid in Escherichia coli.
Verkamp, E., V. M. Backman, J. M. Bjornsson, D. Soll, and G. Eggertsson.
|
| Sequences |
Amino acid
FASTA format
|
0001 MLQFILRRLG LVIPTFIGIT LLTFAFVHMI PGDPVMIMAG ERGISPERHA QLLAELGLDK PMWQQYLHYI
0071 WGVMHGDLGI SMKSRIPVWE EFVPRFQATL ELGVCAMIFA TAVGIPVGVL AAVKRGSIFD HTAVGLALTG
0141 YSMPIFWWGM MLIMLVSVHW NLTPVSGRVS DMVFLDDSNP LTGFMLIDTA IWGEDGNFID AVAHMILPAI
0211 VLGTIPLAVI VRMTRSSMLE VLGEDYIRTA RAKGLTRMRV IIVHALRNAM LPVVTVIGLQ VGTLLAGAIL
0281 TETIFSWPGL GRWLIDALQR RDYPVVQGGV LLVATMIILV NLLVDLLYGV VNPRIRHKK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cagcaatact tcattccctg tccgataagg
-070 gcgggaattg atttgtgagc aatacagaca cgcagttcca ggctgcgggt cactatagag aatccgggtt
0001 atgttgcagt ttattctccg acgtttggga ctcgtcatcc ccacgtttat cggtattacc cttctcacat
0071 ttgcctttgt ccacatgatc ccgggcgatc cggtgatgat catggcgggc gaacgtggga tctccccaga
0141 gcgtcacgcg cagctgctgg ctgaactcgg cttagataaa ccgatgtggc agcagtatct ccattacatt
0211 tggggcgtta tgcatggcga tctaggcatt tcaatgaaaa gccgcatccc ggtttgggaa gagttcgtgc
0281 cgcgcttcca ggccacgctg gaacttggcg tctgcgcgat gatttttgct acggcagtcg gtattccggt
0351 cggcgtgctg gctgcggtta aacgcggttc cattttcgat cacacagcgg ttggcctggc gctgacaggt
0421 tattcaatgc ctatcttctg gtggggcatg atgctgatca tgctggtttc ggtgcactgg aacctgacgc
0491 ccgtctccgg tcgcgtgagc gatatggtgt tcctcgatga ctccaatccg ttaaccggtt ttatgctaat
0561 cgacaccgcc atctggggtg aagacggcaa ctttatcgat gccgtcgccc atatgatctt gcctgccatt
0631 gtgctgggta ctattccgct ggcggtcatt gtgcgtatga cacgctcctc gatgctggaa gtgctgggcg
0701 aggattacat ccgcaccgcg cgcgccaaag ggctaacccg catgcgggtg attatcgtcc atgcgctgcg
0771 taacgcgatg ctgccggtgg tgaccgttat cggcctgcag gtgggaacat tgctggcggg ggcgattctg
0841 accgaaacca tcttctcgtg gcccggtctg ggacgctggt tgattgacgc actgcaacgc cgcgactatc
0911 cggtagtgca gggcggcgta ttgctggtgg cgacgatgat tatcctcgtc aacttgctgg tcgatctgct
0981 gtacggcgtg gtgaacccgc gtattcgtca taagaagtaa ggggacatca tgtcacaggt tactgaaaat
1051 aaagtgatta gcgcaccggt gccgatgacc ccgttacagg agttctggca ctattttaaa cgcaacaaag
|
