MG1655
W3110
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Gene Report : dppD
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
J Bacteriol. 1993;175(5):1452-6.
The periplasmic dipeptide permease system transports 5-aminolevulinic acid in Escherichia coli.
Verkamp E, Backman VM, Bjornsson JM, Soll D, Eggertsson G. ( 8444807 )
     Deletion 2-1 (LD)  ,  OCL10,16-3 (LD 2-1'_CRS) (D)  ,  OCL10,16-4 (LD 2-1'_P/O) (D)  ,  OCL13 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  dppD
Related strains
     Strains Search Search strains by gene name:  dppD   Search strains by all related name:  dppD b3541 ECK3528 f327 JW3510

General information  (Go to Linear View:)
 Gene Name dppD  
 Alternative name b3541,ECK3528,f327,JW3510  
 Location, Length 3,700,888 - 3,701,871 (  -  ) ;   79.77 min ; 984 (bp) ,   327 (aa) Go to Linear View
 Product dipeptide/heme transporter  
 Operon Name dppABCDF  
 Note putative ATP-binding component of dipeptide transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process  
 Function transport; Protein, peptide secretion  
 Gene Ontology GO:0000166 ; nucleotide binding ( dppD )
GO:0005524 ; ATP binding ( dppD )
GO:0005886 ; plasma membrane ( dppD )
GO:0006810 ; transport ( dppD )
GO:0006857 ; oligopeptide transport ( dppD )
GO:0015031 ; protein transport ( dppD )
GO:0015197 ; peptide transporter activity ( dppD )
GO:0015198 ; oligopeptide transporter activity ( dppD )
GO:0015833 ; peptide transport ( dppD )
GO:0016020 ; membrane ( dppD )
GO:0016887 ; ATPase activity ( dppD )
GO:0017111 ; nucleoside-triphosphatase activity ( dppD )
 PID 1789963  
 EC number
  (KEGG Pathway)   		 
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) DPPD_ECOLI ( P37314 )
    -  Protein name Dipeptide transport ATP-binding protein dppD.  
    -  Synonyms  
    -  Gene name Name=dppD; OrderedLocusNames=b3541, z4958, ECs4421, SF3576, S4194;  

 Linear View (Whole Mode)
View Location
   3690.0  –  3715.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP dppD (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain C, Crystal Structure Of Glcv, The Abc-Atpase Of The Glucose Abc Transporter From Sulfolobus Solfataricus  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Dipeptide transport ATP-binding protein dppD  
         PSI-BLAST Methionine import ATP-binding protein metN 1
    nr     (database updated : 2007.02.20 )
         BLAST putative ATP-binding component of dipeptide transport system [Escherichia coli O157:H7 EDL933]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    GLYCOSAMINOGLYCAN    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    TYR_PHOSPHO_SITE    MYRISTYL    ATP_GTP_A    ABC_TRANSPORTER     

Other Cross-Reference
    COG COG0444EP 
    EcoCyc dppD 

MMBR References
Mol Microbiol. 1991;5(5):1035-47.
Peptide transport and chemotaxis in Escherichia coli and Salmonella typhimurium: characterization of the dipeptide permease (Dpp) and the dipeptide-binding protein.
Abouhamad WN, Manson M, Gibson MM, Higgins CF. ( 1956284 )
FEMS Microbiol Lett. 1992;79(1-3):183-90.
Expression of periplasmic binding proteins for peptide transport is subject to negative regulation by phosphate limitation in Escherichia coli.
Smith MW, Payne JW. ( 1478454 )
J Bacteriol. 1993;175:1452-1456
The periplasmic dipeptide permease system transports 5-aminolevulinic acid in Escherichia coli.
Verkamp, E., V. M. Backman, J. M. Bjornsson, D. Soll, and G. Eggertsson.

Sequences
Amino acid
FASTA format 
0001 MALLNVDKLS VHFGDESAPF RAVDRISYSV KQGEVVGIVG ESGSGKSVSS LAIMGLIDYP GRVMAEKLEF 
0071 NGQDLQRISE KERRNLVGAE VAMIFQDPMT SLNPCYTVGF QIMEAIKVHQ GGNKSTRRQR AIDLLNQVGI 
0141 PDPASRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP TTALDVTIQA QIIELLLELQ QKENMALVLI 
0211 THDLALVAEA AHKIIVMYAG QVVETGDAHA IFHAPRHPYT QALLRALPEF AQDKERLASL PGVVPGKYDR 
0281 PNGCLLNPRC PYATDRCRAE EPALNMLADG RQSKCHYPLD DAGRPTL
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             ccgggtctgg cgatcctgct gacggtgctg 
-070 gcatttaacc tgatgggtga cggtctgcgt gacgcgctcg atcccaaact gaagcagtaa gaggttcgag 
0001 atggcgttat taaatgtaga taaattatcg gtgcatttcg gcgacgaaag cgcgccgttc cgcgccgtag 
0071 accgcatcag ctacagcgta aaacagggcg aagtggtcgg gattgtgggt gagtccggct ccggtaagtc 
0141 ggtcagttca ctggcgatta tggggctgat tgattatccg ggccgcgtaa tggcagaaaa actggagttt 
0211 aacggccagg atttgcagcg tatctcagaa aaagagcgcc gcaacctggt gggtgccgaa gtggcgatga 
0281 tcttccagga cccgatgacc agccttaacc cgtgctacac cgtgggtttc cagattatgg aagcgattaa 
0351 ggtgcatcag ggcggcaaca aaagtacccg ccgtcagcga gcgattgacc tgctgaatca ggtcggtatt 
0421 cccgatccgg catcgcgtct ggatgtttac ccgcatcagc tttccggcgg catgagccag cgcgtgatga 
0491 tcgccatggc gattgcctgt cggccaaaac tgctgattgc cgatgaaccg accaccgcgc tggacgtgac 
0561 cattcaggcg caaatcatcg aactactgct ggagctacag cagaaagaga acatggcgct ggtgttaatt 
0631 acccatgacc tggcgctggt ggcggaagcg gcacataaaa tcatcgtgat gtatgcaggc caggtggtgg 
0701 aaaccggtga tgcgcacgcc atcttccatg cgccgcgtca cccgtatact caggcattgc tgcgtgcgct 
0771 gccagaattt gctcaggaca aagaacgtct ggcgtcgttg ccaggtgtcg ttcccggcaa gtacgaccgc 
0841 ccgaacggct gcctgcttaa cccgcgctgc ccctatgcca ctgacagatg tcgcgctgaa gaaccggcgc 
0911 tgaatatgct cgctgacggg cgtcagtcca aatgccatta cccacttgat gatgccggga ggccgacact 
0981 atgagtacgc aagaggccac cctgcaacaa ccgctgttgc aggctatcga cctgaaaaaa cattatccgg 
1051 tgaagaaagg catgttcgcg ccggaacgtc tggt