MG1655
W3110
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Gene Report : dppF
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
J Bacteriol. 1993;175(5):1452-6.
The periplasmic dipeptide permease system transports 5-aminolevulinic acid in Escherichia coli.
Verkamp E, Backman VM, Bjornsson JM, Soll D, Eggertsson G. ( 8444807 )
     Deletion 2-1 (LD)  ,  OCL10,16-3 (LD 2-1'_CRS) (D)  ,  OCL10,16-4 (LD 2-1'_P/O) (D)  ,  OCL13 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  dppF
Related strains
     Strains Search Search strains by gene name:  dppF   Search strains by all related name:  dppF b3540 ECK3527 f334 JW3509

General information  (Go to Linear View:)
 Gene Name dppF  
 Alternative name b3540,ECK3527,f334,JW3509  
 Location, Length 3,699,887 - 3,700,891 (  -  ) ;   79.74 min ; 1005 (bp) ,   334 (aa) Go to Linear View
 Product dipeptide transporter  
 Operon Name dppABCDF  
 Note putative ATP-binding component of dipeptide transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process  
 Function transport; Protein, peptide secretion  
 Gene Ontology GO:0000166 ; nucleotide binding ( dppF )
GO:0005524 ; ATP binding ( dppF )
GO:0005886 ; plasma membrane ( dppF )
GO:0006810 ; transport ( dppF )
GO:0006857 ; oligopeptide transport ( dppF )
GO:0015031 ; protein transport ( dppF )
GO:0015197 ; peptide transporter activity ( dppF )
GO:0015198 ; oligopeptide transporter activity ( dppF )
GO:0015833 ; peptide transport ( dppF )
GO:0016020 ; membrane ( dppF )
GO:0016887 ; ATPase activity ( dppF )
GO:0017111 ; nucleoside-triphosphatase activity ( dppF )
 PID 1789962  
 EC number
  (KEGG Pathway)   		 
SWISS-PROT  ( Show details [ 2 more] )
  botton Entry name(Acc.no) DPPF_ECOLI ( P37313 )
    -  Protein name Dipeptide transport ATP-binding protein dppF.  
    -  Synonyms  
    -  Gene name Name=dppF; Synonyms=dppE; OrderedLocusNames=b3540;  

 Linear View (Whole Mode)
View Location
   3690.0  –  3715.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP dppF (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Structure Of The Atpase Subunit Cysa Of The Putative Sulfate Atp-Binding Cassette (Abc) Transporter From Alicyclobacillus Acidocaldarius  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Dipeptide transport ATP-binding protein dppF  
         PSI-BLAST Dipeptide transport ATP-binding protein dppF
    nr     (database updated : 2007.02.20 )
         BLAST dipeptide transporter [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    GLYCOSAMINOGLYCAN    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    ATP_GTP_A    ABC_TRANSPORTER     

Other Cross-Reference
    COG COG4608E 
    EcoCyc dppF 

MMBR References
Mol Microbiol. 1991;5(5):1035-47.
Peptide transport and chemotaxis in Escherichia coli and Salmonella typhimurium: characterization of the dipeptide permease (Dpp) and the dipeptide-binding protein.
Abouhamad WN, Manson M, Gibson MM, Higgins CF. ( 1956284 )

Sequences
Amino acid
FASTA format 
0001 MSTQEATLQQ PLLQAIDLKK HYPVKKGMFA PERLVKALDG VSFNLERGKT LAVVGESGCG KSTLGRLLTM 
0071 IEMPTGGELY YQGQDLLKHD PQAQKLRRQK IQIVFQNPYG SLNPRKKVGQ ILEEPLLINT SLSKEQRREK 
0141 ALSMMAKVGL KTEHYDRYPH MFSGGQRQRI AIARGLMLDP DVVIADEPVS ALDVSVRAQV LNLMMDLQQE 
0211 LGLSYVFISH DLSVVEHIAD EVMVMYLGRC VEKGTKDQIF NNPRHPYTQA LLSATPRLNP DDRRERIKLS 
0281 GELPSPLNPP PGCAFNARCR RRFGPCTQLQ PQLKDYGGQL VACFAVDQDE NPQR
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             ctgacagatg tcgcgctgaa gaaccggcgc 
-070 tgaatatgct cgctgacggg cgtcagtcca aatgccatta cccacttgat gatgccggga ggccgacact 
0001 atgagtacgc aagaggccac cctgcaacaa ccgctgttgc aggctatcga cctgaaaaaa cattatccgg 
0071 tgaagaaagg catgttcgcg ccggaacgtc tggttaaagc gctggatggc gtttcgttta accttgaacg 
0141 tggcaaaacg ctggcagtag tgggcgaatc tggctgcggt aaatcgaccc tcggtcggtt gctgacgatg 
0211 attgaaatgc ccaccggtgg cgagctgtat taccaggggc aggatctgct taagcacgat ccgcaggcgc 
0281 agaagctgcg tcggcagaaa atccagatcg tcttccagaa cccttacggt tcgctgaatc cgcgtaaaaa 
0351 agtcgggcaa attcttgaag agccgctgct gatcaacacc agcttaagca aagaacagcg tcgggaaaaa 
0421 gccctgtcga tgatggcgaa agtcggcctg aaaaccgagc actatgaccg ctatccgcat atgttctccg 
0491 gcggtcagcg tcagcgtatc gccatcgccc gtggtctgat gctcgacccg gatgtggtga ttgccgatga 
0561 accggtttcc gcgctggatg tttcagtgcg cgcgcaggtg ctgaatctga tgatggattt gcagcaggag 
0631 ttggggctgt cttatgtctt tatctcccac gacctgtcgg tggtggagca cattgctgat gaagtgatgg 
0701 tgatgtacct gggccgctgc gtggagaagg gaacgaaaga ccaaatcttc aataacccgc gccatccgta 
0771 cactcaggcg ctactttccg cgacgccgcg cctgaacccg gacgatcgcc gcgagcgcat caagctcagc 
0841 ggtgaactac caagcccact gaatccaccg ccgggttgcg ccttcaacgc ccgctgtcgt cggcgcttcg 
0911 gcccctgcac ccagttgcag ccgcagctaa aagactacgg cggtcaactg gtagcttgtt ttgctgttga 
0981 tcaggatgaa aatccgcagc gttaactcac aaaaccgggg ccatgcgctc cggtttactc aatcagcttc 
1051 aacagtggcg acaagcatag caaaatgccg tacagcagaa tcagccaggc tttaa