|
PEC Original Annotations
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|
Essentiality
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|
Class
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non-essential
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|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
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Deletion
|
OCL18
(D)
,
OCL18-2
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ugpA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ugpA
Search strains by all related name:
ugpA b3452 ECK3436 JW3417 psiB psiC
|
General information (Go to Linear View: )
|
|
Gene Name
|
ugpA
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|
Alternative name
|
b3452,ECK3436,JW3417,psiB,psiC
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Location, Length
|
3,588,047 - 3,588,934
(
-
)
;
77.33
min
;
888
(bp) ,
295
(aa)
|
|
Product
|
glycerol-3-phosphate transporter subunit
|
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Operon Name
|
ugpBAECQ
|
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Note
|
sn-glycerol 3-phosphate transport system, integral membrane protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006071 - glycerol metabolic process; GO_process: GO:0008654 - phospholipid biosynthetic process
|
|
Function
|
transport; Transport of small molecules: Carbohydrates, organic acids, alcohols
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( ugpA )
GO:0005886
;
plasma membrane ( ugpA )
GO:0006810
;
transport ( ugpA )
GO:0016020
;
membrane ( ugpA )
GO:0016021
;
integral to membrane ( ugpA )
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PID
|
1789861
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EC number
(KEGG Pathway)
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|
|
SWISS-PROT
(
Show details
[
3
more]
)
|
Entry name(Acc.no)
|
PSB1_ECOLI
(
P10031
)
|
|
- Protein name
|
PsiB protein.
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- Synonyms
|
|
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- Gene name
|
Name=psiB; OrderedLocusNames=ECOK12F063;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
ugpA
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
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PSI-BLAST
|
|
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SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
sn-glycerol-3-phosphate transport system permease protein ugpA
|
|
PSI-BLAST
|
sn-glycerol-3-phosphate transport system permease protein ugpA
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
glycerol-3-phosphate transporter subunit [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
BPD_TRANSP_INN_MEMBR
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MMBR References
|
J Bacteriol. 1991;173(2):549-58.
Dual regulation of the ugp operon by phosphate and carbon starvation at two interspaced promoters.
Kasahara M, Makino K, Amemura M, Nakata A, Shinagawa H.
(
1987150
)
|
Antimicrob Agents Chemother. 1981;19(4):678-81.
Effects of halo analogs of glycerol 3-phosphate and dihydroxyacetone phosphate upon Escherichia coli.
Mildener B, Fondy TP, Engel R, Tropp BE.
(
7018394
)
|
Mol Microbiol. 1988;2(6):767-75.
Nucleotide sequence of the ugp genes of Escherichia coli K-12: homology to the maltose system.
Overduin P, Boos W, Tommassen J.
(
3062310
)
|
Mol Gen Genet. 1971;111(1):84-8.
Fluorouracil and the isolation of mutants lacking uridine phosphorylase in Escherichia coli: location of the gene.
Pritchard RH, Ahmad SI.
(
4932245
)
|
J Bacteriol. 1982;150(3):1164-71.
Mapping of two ugp genes coding for the pho regulon-dependent sn-glycerol-3-phosphate transport system of Escherichia coli.
Schweizer H, Grussenmeyer T, Boos W.
(
6281238
)
|
Mol Gen Genet. 1983;192(1-2):177-86.
Cloning of the ugp region containing the structural genes for the pho regulon-dependent sn-glycerol-3-phosphate transport system of Escherichia coli.
Schweizer H, Boos W.
(
6227795
)
|
Mol Gen Genet. 1984;197(1):161-8.
Characterization of the ugp region containing the genes for the phoB dependent sn-glycerol-3-phosphate transport system of Escherichia coli.
Schweizer H, Boos W.
(
6392822
)
|
Mol Gen Genet. 1991;230(1-2):28-32.
Carbon-starvation induction of the ugp operon, encoding the binding protein-dependent sn-glycerol-3-phosphate transport system in Escherichia coli.
Su TZ, Schweizer HP, Oxender DL.
(
1745236
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MSSSRPVFRS RWLPYLLVAP QLIITVIFFI WPAGEALWYS LQSVDPFGFS SQFVGLDNFV TLFHDSYYLD
0071 SFWTTIKFST FVTVSGLLVS LFFAALVEYI VRGSRFYQTL MLLPYAVAPA VAAVLWIFLF NPGRGLITHF
0141 LAEFGYDWNH AQNSGQAMFL VVFASVWKQI SYNFLFFYAA LQSIPRSLIE AAAIDGAGPI RRFFKIALPL
0211 IAPVSFFLLV VNLVYAFFDT FPVIDAATSG GPVQATTTLI YKIYREGFTG LDLASSAAQS VVLMFLVIVL
0281 TVVQFRYVES KVRYQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 taatcagtgt aatgtcggat gcgtttcgct
-070 tatctgacct ggcatcgcgt gtaggccgga taagcgaagc gcatccggca cagttcagga attaaccgta
0001 atgtcatcat cccgtccggt gttccgctcg cgctggctgc cttatctgct ggtcgcgccg cagctcatca
0071 tcaccgttat cttttttatc tggcctgcgg gcgaagcgtt gtggtactcg ctacaaagcg tcgatccgtt
0141 tggtttctcc agccagtttg tcggcctgga taacttcgtc acgctgttcc atgacagcta ctatctcgac
0211 tccttctgga cgacgataaa attcagcacc tttgtcaccg tcagcggttt gctggtatcg ctgttctttg
0281 cggcgctggt ggagtacatc gtgcgcggca gccgtttcta tcaaacctta atgttgctgc cttacgccgt
0351 ggctcccgcc gttgccgccg tattgtggat cttcctgttt aaccccggtc gcgggctgat cacccatttt
0421 ctcgcggagt tcggctacga ctggaaccac gcgcaaaaca gcggtcaggc aatgtttctg gtggtgtttg
0491 cctcagtatg gaagcaaatc agctacaact tcctgttctt ctatgccgcg ctgcaatcca ttccccgttc
0561 gttgatcgaa gccgcagcca tcgacggtgc agggccgatt cgccgcttct ttaagattgc gctgccgctt
0631 atcgccccgg tgagtttctt cctgctggta gtgaacctgg tgtatgcctt cttcgacacc ttcccggtga
0701 tcgacgccgc cacgtccggc gggccggttc aggccaccac gacgctgatt tataagatct accgcgaagg
0771 ttttaccgga ctggatctgg cttcgtctgc cgcacagtcg gtggtgttga tgttcctcgt catcgtgctg
0841 acggtggtgc agttccgcta tgttgaaagc aaggtgcgtt accaatgatt gagaaccgtc cgtggctgac
0911 gatattcagc cataccatgc tgatcctcgg gatcgcggtg atcctcttcc cgctgtacgt ggcgtttgtc
0981 gcggcgac
|
