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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Deletion
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OCL23
(D)
,
OCL23-14
(D)
,
OCL23-7
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
yhdY
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Related strains
|
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Strains Search
|
Search strains by gene name:
yhdY
Search strains by all related name:
yhdY b3270 ECK3257 JW5545 o368
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General information (Go to Linear View: )
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Gene Name
|
yhdY
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Alternative name
|
b3270,ECK3257,JW5545,o368
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Location, Length
|
3,419,347 - 3,420,450
(
+
)
;
73.70
min
;
1104
(bp) ,
367
(aa)
|
|
Product
|
putative amino-acid transporter subunit
|
|
Operon Name
|
yhdWXYZ
|
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Note
|
putative transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
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Function
|
putative transport; Not classified
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Gene Ontology
|
GO:0005215
;
transporter activity ( yhdY )
GO:0005886
;
plasma membrane ( yhdY )
GO:0006810
;
transport ( yhdY )
GO:0006865
;
amino acid transport ( yhdY )
GO:0009276
;
1-2nm peptidoglycan-based cell wall ( yhdY )
GO:0016020
;
membrane ( yhdY )
GO:0016021
;
integral to membrane ( yhdY )
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|
PID
|
87082239
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EC number
(KEGG Pathway)
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|
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SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YHDY_ECOLI
(
P45768
)
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- Protein name
|
Hypothetical amino-acid ABC transporter permease protein yhdY.
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- Synonyms
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- Gene name
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Name=yhdY; OrderedLocusNames=b3270;
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| Sequences |
Amino acid
FASTA format
|
0001 MTKVLLSHPP RPASHNSSRA MVWVRKNLFS SWSNSLLTIG CIWLMWELIP PLLNWAFLQA NWVGSTRADC
0071 TKAGACWVFI HERFGQFMYG LYPHDQRWRI NLALLIGLVS IAPMFWKILP HRGRYIAAWA VIYPLIVWWL
0141 MYGGFFALER VETRQWGGLT LTLIIASVGI AGALPWGILL ALGRRSHMPI VRILSVIFIE FWRGVPLITV
0211 LFMSSVMLPL FMAEGTSIDK LIRALVGVIL FQSAYVAEVV RGGLQALPKG QYEAAESLAL GYWKTQGLVI
0281 LPQALKLVIP GLVNTIIALF KDTSLVIIIG LFDLFSSVQQ ATVDPAWLGM STEGYVFAAL IYWIFCFSMS
0351 RYSQYLEKRF NTGRTPH
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CATGACCATG TCGGTCTATC TGATTATCAG
-070 CCTGACTATC TCGCTGCTGA TGAATATCTA TAACCGCCGC ATCGCGATCG TTGAACGCTA AGGAGTCATG
0001 atgacaaaag tattgctgtc tcatcccccg cgcccggcga gccataactc aagccgcgcg atggtgtggg
0071 tgcgaaaaaa tctgttctcc agctggagca atagcctgct gactattggc tgcatatggt tgatgtggga
0141 actgatccca ccgttgctga actgggcatt tttgcaggct aactgggttg gctcaacgcg tgccgactgc
0211 acaaaagccg gtgcctgttg ggtcttcatc cacgaacgat ttggtcagtt tatgtatggg ctttacccac
0281 acgaccaacg ctggcgaatt aacctcgcat tactgattgg gcttgtgtcg atcgcaccaa tgttctggaa
0351 aatactcccg catcgcggtc gctatattgc ggcctgggcg gtgatttacc cactgattgt ctggtggctg
0421 atgtatggcg gtttttttgc tcttgagcgg gttgaaaccc ggcaatgggg cgggctgacg ctaactttaa
0491 ttattgcatc agttgggatt gcgggggcgc taccgtgggg gatcttactg gcgttaggtc gccgctccca
0561 tatgccgatt gtgcgtatct tatcggtcat ttttatcgaa ttctggcgcg gcgtgccgct gattaccgtt
0631 ctgtttatgt cttcggtcat gctgccgttg tttatggcag aaggcaccag tatcgacaaa ttgatccgcg
0701 cgctggttgg cgtgatcctg tttcagtcag catatgttgc ggaagtcgtg cgaggtggat tacaggcgct
0771 gcctaaaggg caatatgaag cggcagagtc gctggcgttg ggttactgga aaactcaggg gctggttatt
0841 ctgccacagg cgttgaagct ggtaattcct gggctggtaa ataccatcat cgcactcttc aaagatacca
0911 gcctggtgat cattatcggg ttgttcgatc ttttcagtag cgttcagcag gcaaccgttg atcccgcctg
0981 gttgggtatg tcgacggaag ggtatgtttt cgccgcgctg atctactgga tcttctgttt cagcatgtcg
1051 cgctatagcc agtatctgga aaaacgtttt aacaccgggc gtacaccgca ttgaGGACAC TATGAGCCAA
1121 ATTTTACTGC AACCTGCTAA CGCGATGATT ACGCTGGAAA ACGTCAATAA ATGGTATGGA CAATTCCATG
1191 TTTTGAAAAA TATA
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