|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL36
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yghA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yghA
Search strains by all related name:
yghA b3003 ECK2997 JW2972 o294
|
General information (Go to Linear View: )
|
|
Gene Name
|
yghA
|
|
Alternative name
|
b3003,ECK2997,JW2972,o294
|
|
Location, Length
|
3,147,684 - 3,148,568
(
+
)
;
67.84
min
;
885
(bp) ,
294
(aa)
|
|
Product
|
putative oxidoreductase
|
|
Operon Name
|
yghA
|
|
Note
|
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( yghA )
GO:0005488
;
binding ( yghA )
GO:0008152
;
metabolic process ( yghA )
GO:0016491
;
oxidoreductase activity ( yghA )
|
|
PID
|
1789378
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YGHA_ECOLI
(
P25887
;
Q46852
)
|
|
- Protein name
|
Hypothetical oxidoreductase yghA
|
|
- Synonyms
|
EC 1.-.-.-
|
|
- Gene name
|
Name=yghA; OrderedLocusNames=b3003, z4356, ECs3887;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yghA
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical oxidoreductase yghA
|
|
PSI-BLAST
|
3-oxoacyl-[acyl-carrier-protein] reductase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
oxidoreductase [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
GLYCOSAMINOGLYCAN
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
ADH_SHORT
|
| Sequences |
Amino acid
FASTA format
|
0001 MSHLKDPTTQ YYTGEYPKQK QPTPGIQAKM TPVPDCGEKT YVGSGRLKDR KALVTGGDSG IGRAAAIAYA
0071 REGADVAISY LPVEEEDAQD VKKIIEECGR KAVLLPGDLS DEKFARSLVH EAHKALGGLD IMALVAGKQV
0141 AIPDIADLTS EQFQKTFAIN VFALFWLTQE AIPLLPKGAS IITTSSIQAY QPSPHLLDYA ATKAAILNYS
0211 RGLAKQVAEK GIRVNIVAPG PIWTALQISG GQTQDKIPQF GQQTPMKRAG QPAELAPVYV YLASQESSYV
0281 TAEVHGVCGG EHLG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGTCGCATAA TTCTGAGGTT TAGGGATCTT
-070 CCTGGTTCCC TTATCAACGC ATCGAGAACG TCTACCCTTA AAGGACGTTG AACCTGAAGG GAGAAAAACG
0001 atgtctcatt taaaagaccc gaccacgcag tattacactg gtgaatatcc caaacagaaa caaccgacgc
0071 caggcatcca ggcgaagatg acaccggtac cggattgcgg cgagaaaacc tatgttggta gcggtcgcct
0141 gaaagatcgt aaagcactgg tgacaggggg cgattccgga ataggtcgcg ctgccgccat cgcttacgcg
0211 cgtgaagggg ctgacgtggc gatcagttat cttcccgtgg aagaagaaga cgctcaggat gtgaaaaaga
0281 tcattgaaga atgcggacgc aaagccgttc tgctgccagg cgatttaagc gatgagaaat ttgcccgttc
0351 gctggttcac gaagcgcaca aggcgttagg cgggctggat attatggcgc tggtcgccgg gaaacaggtt
0421 gccattccgg atattgcaga cctcaccagc gaacagtttc aaaagacctt tgccattaac gttttcgcgc
0491 tgttctggct aacccaggaa gcgatccccc tgctaccgaa aggtgcaagt atcatcacca cttcgtcaat
0561 ccaggcatac cagccaagtc cgcatttact ggactatgcg gctacgaagg cggcgattct gaactacagc
0631 cgtggcttgg caaaacaggt cgcggagaaa ggtattcggg tgaatattgt cgcgccaggc ccgatctgga
0701 cagcactgca aatttccggc ggacaaacgc aggataagat cccgcagttt ggtcagcaaa cgccgatgaa
0771 acgtgcgggg caaccggcgg aactggcccc tgtatatgtt tatctggcaa gtcaggagtc gagctacgtc
0841 accgcagaag tgcacggcgt gtgcggcggc gagcatttag gttaaAAAAA TGCCCGGTTG TGAAAAGCAA
0911 CCGGGCATCA TTGTGAATTC ACTCTTACCT GATGTGGCGA AAACGCCTTA TCCGCCTACA AACGCATGAA
0981 GATTC
|
