|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
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|
References (PMID)
|
|
|
Deletion
|
OCL60-10
(D)
,
OCL60-18
(D)
,
OCL60-21
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ucpA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ucpA
Search strains by all related name:
ucpA b2426 ECK2421 f285 JW5394 yfeF
|
General information (Go to Linear View: )
|
|
Gene Name
|
ucpA
|
|
Alternative name
|
b2426,ECK2421,f285,JW5394,yfeF
|
|
Location, Length
|
2,541,854 - 2,542,645
(
-
)
;
54.79
min
;
792
(bp) ,
263
(aa)
|
|
Product
|
furfural resistance protein, predicted short-chain oxidoreductase
|
|
Operon Name
|
ucpA
|
|
Note
|
putative oxidoreductase
|
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Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( ucpA )
GO:0005488
;
binding ( ucpA )
GO:0005515
;
protein binding ( ucpA )
GO:0008152
;
metabolic process ( ucpA )
GO:0016491
;
oxidoreductase activity ( ucpA )
|
|
PID
|
87082100
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
UCPA_ECOLI
(
P37440
;
P76963; P77140; P77442
)
|
|
- Protein name
|
Oxidoreductase ucpA
|
|
- Synonyms
|
EC 1.-.-.-
|
|
- Gene name
|
Name=ucpA; OrderedLocusNames=b2426;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ucpA
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Oxidoreductase ucpA
|
|
PSI-BLAST
|
Oxidoreductase ucpA
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative oxidoreductase [Shigella boydii Sb227]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
EF_HAND
ADH_SHORT
|
|
MMBR References
|
Acta Biochim Pol. 1997;44(1):153-7.
Characterization of the Escherichia coli gene encoding a new member of the short-chain dehydrogenase/reductase (SDR) family.
Sirko A, Weglenska A, Hryniewicz M, Hulanicka DM.
(
9241368
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MGKLTGKTAL ITGALQGIGE GIARTFARHG ANLILLDISP EIEKLADELC GRGHRCTAVV ADVRDPASVA
0071 AAIKRAKEKE GRIDILVNNA GVCRLGSFLD MSDDDRDFHI DINIKGVWNV TKAVLPEMIA RKDGRIVMMS
0141 SVTGDMVADP GETAYALTKA AIVGLTKSLA VEYAQSGIRV NAICPGYVRT PMAESIARQS NPEDPESVLT
0211 EMAKAIPMRR LADPLEVGEL AAFLASDESS YLTGTQNVID GGSTLPETVS VGI
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttcctgaatt agtgagctga tccgcagcaa
-070 tattttgttt atcctgtatt ttcagaggga atggagtgta acgctctgta ttaacaagga gagcattaaa
0001 atgggtaaac tcacgggcaa gacagcactg attacgggcg cattgcaggg aattggcgaa ggaattgcca
0071 gaacttttgc acgtcatggc gcgaacctaa tcttgctgga tatctcccct gagatcgaaa agctggcgga
0141 cgaactgtgt ggtcgtggtc atcgctgtac ggcggttgtc gccgatgtgc gtgacccggc gtcggtagcc
0211 gcagctatca aacgcgcgaa ggaaaaagaa gggcgcattg atatcctggt gaataacgca ggcgtttgtc
0281 gtctgggcag tttcctcgat atgagcgatg acgatcgcga tttccatatt gacatcaata ttaaaggcgt
0351 atggaacgtc acgaaggcgg tgctgccgga gatgattgcc cgcaaagatg gtcgcattgt gatgatgtct
0421 tcagtcactg gtgatatggt ggccgatcct ggcgaaacgg cgtacgcctt aacgaaagcg gcgattgttg
0491 gcctgacaaa atcgctggcg gtggagtacg cgcagtctgg tattcgcgtt aacgccattt gcccgggata
0561 cgtgcgcaca ccaatggcgg aaagcattgc ccgccagtcg aacccggaag atccagagtc ggtgctgact
0631 gaaatggcga aagcaatccc gatgcgtcgc ctcgccgatc cgctggaagt cggcgaactg gcggccttcc
0701 tcgcatcgga tgaatccagc tatttaaccg gtacacagaa tgtgattgat ggcggcagca cactgccgga
0771 gacggttagc gtcggtatct gattcacctc tgtttcctcc ctgcatttgt ggggaggatt tcgtcttgaa
0841 ctaagttcac caggctattt tatttgtcat tttggccccg ggcagtgctc ga
|
