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PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
J Bacteriol. 1990;172(6):3191-200.
Identification of phosphate starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu d1) transcriptional fusions.
Metcalf WW, Steed PM, Wanner BL.
(
2160940
)
|
|
|
Deletion
|
13
(LD)
,
OCL67,68-3 (LD 13B_CRS)
(D)
,
OCL67,68-4 (LD 13B_PO)
(D)
,
OCL68
(D)
,
OCL68,69-10 (BK9-6 / AK7-6)
(D)
,
OCL68,69-9 (BK9-6 / AK6-6)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
glpB
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
glpB
Search strains by all related name:
glpB b2242 ECK2234 glpC JW2236 psi-51
|
General information (Go to Linear View: )
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Gene Name
|
glpB
|
|
Alternative name
|
b2242,ECK2234,glpC,JW2236,psi-51
|
|
Location, Length
|
2,352,287 - 2,353,546
(
+
)
;
50.70
min
;
1260
(bp) ,
419
(aa)
|
|
Product
|
sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit
|
|
Operon Name
|
glpABC
|
|
Note
|
GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006071 - glycerol metabolic process
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Function
|
enzyme; Energy metabolism, carbon: Anaerobic respiration
|
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Gene Ontology
|
GO:0004368
;
glycerol-3-phosphate dehydrogenase activity ( glpB )
GO:0005506
;
iron ion binding ( glpC )
GO:0005886
;
plasma membrane ( glpB )
GO:0005886
;
plasma membrane ( glpC )
GO:0006118
;
electron transport ( glpB )
GO:0006118
;
electron transport ( glpC )
GO:0006810
;
transport ( glpC )
GO:0009055
;
electron carrier activity ( glpC )
GO:0016020
;
membrane ( glpB )
GO:0016020
;
membrane ( glpC )
GO:0016491
;
oxidoreductase activity ( glpB )
GO:0016491
;
oxidoreductase activity ( glpC )
GO:0046872
;
metal ion binding ( glpC )
GO:0051536
;
iron-sulfur cluster binding ( glpC )
GO:0051539
;
4 iron, 4 sulfur cluster binding ( glpC )
|
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PID
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1788575
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EC number
(KEGG Pathway)
|
1.1.5.3
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
glpB
(
EG10392
)
|
|
Number of removed
|
0 aa cleaved
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
GLPB_ECOLI
(
P13033
)
|
|
- Protein name
|
Anaerobic glycerol-3-phosphate dehydrogenase subunit B
|
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- Synonyms
|
EC 1.1.99.5, Anaerobic G-3-P dehydrogenase subunit B, Anaerobic G3Pdhase B
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- Gene name
|
Name=glpB; OrderedLocusNames=b2242;
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MMBR References
|
J Bacteriol. 1987;169(2):526-32.
Divergent transcription of the sn-glycerol-3-phosphate active transport (glpT) and anaerobic sn-glycerol-3-phosphate dehydrogenase (glpA glpC glpB) genes of Escherichia coli K-12.
Ehrmann M, Boos W, Ormseth E, Schweizer H, Larson TJ.
(
3027032
)
|
Biochem Cell Biol. 1995;73(3-4):147-53.
Physiological role of GlpB of anaerobic glycerol-3-phosphate dehydrogenase of Escherichia coli.
Varga ME, Weiner JH.
(
7576488
)
|
J Bacteriol. 1988;170(6):2448-56.
Nucleotide sequence and gene-polypeptide relationships of the glpABC operon encoding the anaerobic sn-glycerol-3-phosphate dehydrogenase of Escherichia coli K-12.
Cole ST, Eiglmeier K, Ahmed S, Honore N, Elmes L, Anderson WF, Weiner JH.
(
3286606
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MRFDTVIMGG GLAGLLCGLQ LQKHGLRCAI VTRGQSALHF SSGSLDLLSH LPDGQPVTDI HSGLESLRQQ
0071 APAHPYSLLE PQRVLDLACQ AQALIAESGA QLQGSVELAH QRVTPLGTLR STWLSSPEVP VWPLPAKKIC
0141 VVGISGLMDF QAHLAAASLR ELGLAVETAE IELPELDVLR NNATEFRAVN IARFLDNEEN WPLLLDALIP
0211 VANTCEMILM PACFGLADDK LWRWLNEKLP CSLMLLPTLP PSVLGIRLQN QLQRQFVRQG GVWMPGDEVK
0281 KVTCKNGVVN EIWTRNHADI PLRPRFAVLA SGSFFSGGLV AERNGIREPI LGLDVLQTAT RGEWYKGDFF
0351 APQPWQQFGV TTDETLRPSQ AGQTIENLFA IGSVLGGFDP IAQGCGGGVC AVSALHAAQQ IAQRAGGQQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AAAGGCGTGC AACCCATCGC CTGGGGAGAT
-070 GCACTGCGCG AAAGCGAATT TACCCGCTGG GTTTATCAGG GATTGTGTGG TCTGGAGAAG GAGCAGAAAG
0001 atgcgctttg atactgtcat tatgggcggc ggcctcgccg gattactctg tggcctgcaa ctgcaaaaac
0071 acggcctgcg ctgtgccatt gtcactcgtg gtcaaagcgc actgcatttc tcatccggat cgctggattt
0141 gctgagccat ctgccagatg gtcaaccggt gacagacatt cacagtggac tggaatcttt gcgtcagcag
0211 gcaccagccc atccttactc ccttctcgag ccacaacgcg tgctcgatct cgcttgccag gcgcaggcat
0281 taatcgctga aagcggtgcg caattgcagg gcagcgtaga acttgctcac cagcgggtta cgccgctcgg
0351 cactctgcgc tctacctggc taagttcgcc agaagtcccc gtctggccgc tgcccgcgaa gaaaatatgt
0421 gtagtgggaa ttagcggcct gatggatttt caggcgcacc ttgcggcagc ttcgttgcgt gaactcggcc
0491 ttgccgttga aaccgcagaa atagagctgc cggaactgga tgtgctgcgc aataacgcca ccgaatttcg
0561 cgcggtgaat atcgcccgtt tccttgataa tgaagaaaac tggccgctgt tacttgatgc gcttattcct
0631 gtcgccaata cctgcgaaat gatcctgatg cccgcctgct tcggtctggc cgatgacaaa ctgtggcgtt
0701 ggttgaatga aaaactacct tgttcactga tgcttttgcc aacgctgccg ccttccgtgc tgggcattcg
0771 tctgcaaaac cagttacagc gccagtttgt gcgccagggt ggcgtgtgga tgccgggcga tgaagtgaaa
0841 aaagtgacct gtaaaaatgg cgtagtgaac gaaatctgga cccgcaatca cgccgatatt ccgctacgtc
0911 cacgtttcgc ggttctcgcc agcggcagtt tctttagtgg cggactggta gcggaacgta acggcattcg
0981 agagccgatt ctcggccttg atgtgctaca aaccgccacg cggggtgaat ggtataaggg agattttttt
1051 gcgccgcaac cgtggcagca gttcggtgta accactgatg agacgctacg cccgtcacag gcagggcaaa
1121 ccattgaaaa cctgtttgcc atcggttcgg tgctgggcgg atttgatccc atcgcccagg gatgcggcgg
1191 cggtgtttgt gccgtcagtg ctttacatgc cgctcaacag attgcccaac gcgcaggagg ccaacaatga
1261 ATGACACCAG CTTCGAAAAC TGCATTAAGT GCACCGTCTG CACCACCGCC TGCCCGGTGA GCCGGGTGAA
1331 TCCCGGTTAT CCAGGGCCAA AACAAGCCGG
|
