|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
16-1-2
(LD)
,
DE(sbcB-rfb)202
,
DE(his-dcd)453
,
OCL74-2,75-5 (LD 16-1-2_CRS)
(D)
,
OCL74-2,75-6 (LD 16-1-2_P/O)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yegH
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yegH
Search strains by all related name:
yegH b2063 ECK2057 JW5336 o549
|
General information (Go to Linear View: )
|
|
Gene Name
|
yegH
|
|
Alternative name
|
b2063,ECK2057,JW5336,o549
|
|
Location, Length
|
2,135,926 - 2,137,509
(
+
)
;
46.04
min
;
1584
(bp) ,
527
(aa)
|
|
Product
|
inner membrane protein
|
|
Operon Name
|
yegH
|
|
Note
|
putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( yegH )
GO:0016020
;
membrane ( yegH )
GO:0016021
;
integral to membrane ( yegH )
|
|
PID
|
87082033
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YEGH_ECOLI
(
P76389
;
P94756
)
|
|
- Protein name
|
Hypothetical UPF0053 protein yegH.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yegH; OrderedLocusNames=b2063;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yegH
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
unnamed protein product [Neisseria meningitidis serogroup B]
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0053 protein yegH
|
|
PSI-BLAST
|
UPF0053 protein yegH
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein APECO1_1153 [Escherichia coli APEC O1]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MEWIADPSIW AGLITLIVIE LVLGIDNLVF IAILAEKLPP KQRDRARVTG LLLAMLMRLL LLASISWLVT
0071 LTQPLFSFRS FTFSARDLIM LFGGFFLLFK ATMELNERLE GKDSNNPTQR KGAKFWGVVT QIVVLDAIFS
0141 LDSVITAVGM VDHLLVMMAA VVIAISLMLM ASKPLTQFVN SHPTIVILCL SFLLMIGFSL VAEGFGFVIP
0211 KGYLYAAIGF SVMIEALNQL AIFNRRRFLS ANQTLRQRTT EAVMRLLSGQ KEDAELDAET ASMLVDHGNQ
0281 QIFNPQERRM IERVLNLNQR TVSSIMTSRH DIEHIDLNAP EEEIRQLLER NQHTRLVVTD GDDAEDLLGV
0351 VHVIDLLQQS LRGEPLNLRV LIRQPLVFPE TLPLLPALEQ FRNARTHFAF VVDEFGSVEG IVTLSDVTET
0421 IAGNLPNEVE EIDARHDIQK NADGSWTANG HMPLEDLVQY VPLPLDEKRE YHTIAGLLME YLQRIPKPGE
0491 EVQVGDYLLK TLQVESHRVQ KVQIIPLRKD GEMEYEV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AATATGAGAT AAATAGTGCT GCAACATTGC
-070 ATTTTTGCCC CGATTTATCC ATGATCGAAT TGTGACATTT GTCATACAAC GAATAGGTTT TGTACTTACT
0001 atggaatgga ttgccgatcc gtctatctgg gccgggttaa tcacgctgat tgtgatcgaa ctggtcctcg
0071 gcattgataa cctggtcttt attgccatcc tcgccgaaaa actaccgccg aagcagcgtg accgcgcacg
0141 ggttaccggg ctgctgctgg caatgttaat gcgcctgtta ctgctggcgt caatctcctg gctggtcacc
0211 ctgactcaac cgctgttcag cttccgctcg tttaccttta gcgcccgcga cttaatcatg ctgtttggtg
0281 gtttcttcct gttgttcaaa gccacgatgg agctgaacga acggctggaa gggaaagaca gcaataatcc
0351 cacacaacgc aaaggtgcga agttctgggg cgtggtgacg caaattgtgg tactggacgc cattttctca
0421 ctcgactcag tgattaccgc cgtcgggatg gtcgaccatt tactggtcat gatggccgcc gtggttatcg
0491 ctatcagcct gatgttgatg gccagcaagc cgttaacgca atttgttaac agtcacccga cgatcgttat
0561 tctctgctta agcttcctgt tgatgattgg ctttagcctg gtggcagaag gtttcggctt cgtcattccg
0631 aaaggctacc tgtacgctgc cattggtttc tcggtgatga tcgaggcgct caatcagttg gctatcttta
0701 accggcgacg ttttctttcc gctaaccaga cgctgcgcca gcggactacc gaagcggtaa tgcgcctgct
0771 tagcgggcaa aaagaagatg cggaactgga cgccgaaacc gcgtccatgc tggtggatca tggtaaccag
0841 cagatcttta atccgcagga acggcggatg attgagcggg tacttaatct taaccagcgt accgtcagca
0911 gcattatgac gtcgcgccac gatattgagc atatcgatct caacgcgccg gaagaagaaa tccgccagtt
0981 gctggagcga aatcagcata cgcggctggt ggttaccgac ggtgatgacg cagaagattt gctcggtgtt
1051 gttcacgtta tcgacctgct acaacagtct ctgcgcggcg aaccgctcaa cctgcgggtg ttgattcgcc
1121 agccgctggt gttcccggaa accttgccgt tgttacctgc cctggagcag ttccgtaatg cccgcacgca
1191 ctttgctttt gtggtggatg agtttggctc ggtggaaggg attgtgacat taagtgacgt cactgaaacc
1261 attgccggta acttaccgaa cgaagtggaa gagatcgacg cccgccatga tattcagaag aatgcggacg
1331 gttcctggac ggcgaatggt catatgccgc tggaggatct ggtgcaatat gtgccgctgc cgctggatga
1401 aaaacgtgaa tatcacacca ttgccgggct gttgatggag tatttgcagc gtattccaaa acctggcgaa
1471 gaagttcagg tgggggatta tttgcttaaa acgttgcagg tagaaagcca tcgcgtgcag aaggtgcaga
1541 ttataccgct gcgtaaggat ggcgagatgg agtacgaggt gtgaTGGTAT CGGTCATTTT ACCCAATAGC
1611 CGAAAGGAAT AAGATGAGGG AACCGCGCCA TCGGCGATTT ACCGCCGGGA GCCCGGGTTG CCAGGGTGGT
1681 GGAG
|
