|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
LD3-5-1
(LD)
,
OCL78
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yecC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yecC
Search strains by all related name:
yecC b1917 ECK1916 f250 JW1902
|
General information (Go to Linear View: )
|
|
Gene Name
|
yecC
|
|
Alternative name
|
b1917,ECK1916,f250,JW1902
|
|
Location, Length
|
1,995,086 - 1,995,838
(
-
)
;
43.00
min
;
753
(bp) ,
250
(aa)
|
|
Product
|
putative transporter subunit: ATP-binding component of ABC superfamily
|
|
Operon Name
|
dcyD-yecSC
|
|
Note
|
putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0000166
;
nucleotide binding ( yecC )
GO:0005524
;
ATP binding ( yecC )
GO:0005886
;
plasma membrane ( yecC )
GO:0006810
;
transport ( yecC )
GO:0006865
;
amino acid transport ( yecC )
GO:0016020
;
membrane ( yecC )
GO:0016887
;
ATPase activity ( yecC )
GO:0017111
;
nucleoside-triphosphatase activity ( yecC )
|
|
PID
|
1788225
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YECC_ECOLI
(
P37774
;
P76314
)
|
|
- Protein name
|
Hypothetical amino-acid ABC transporter ATP-binding protein yecC.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yecC; OrderedLocusNames=b1917;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yecC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain 1, Malk
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical amino-acid ABC transporter ATP-binding protein yecC
|
|
PSI-BLAST
|
Phosphate import ATP-binding protein pstB
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative ATP-binding component of a transport system [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
GLYCOSAMINOGLYCAN
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
ATP_GTP_A
ABC_TRANSPORTER
|
| Sequences |
Amino acid
FASTA format
|
0001 MSAIEVKNLV KKFHGQTVLH GIDLEVKPGE VVAIIGPSGS GKTTLLRSIN LLEQPEAGTI TVGDITIDTA
0071 RSLSQQKSLI RQLRQHVGFV FQNFNLFPHR TVLENIIEGP VIVKGEPKEE ATARARELLA KVGLAGKETS
0141 YPRRLSGGQQ QRVAIARALA MRPEVILFDE PTSALDPELV GEVLNTIRQL AQEKRTMVIV THEMSFARDV
0211 ADRAIFMDQG RIVEQGAAKA LFADPEQPRT RQFLEKFLLQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 atctggcggc ttcgctcatc tactggatca
-070 tggcgactgt gttatcgacg ttgcagaacc attttgagaa tcaacttaat cgccaggaga gagaaccaaa
0001 atgagtgcca ttgaagttaa gaacctggtg aaaaaattcc acggtcagac ggtgctgcac ggtatcgacc
0071 ttgaggtaaa gcctggcgaa gtggtggcaa ttatcggtcc gagtggttcc ggcaaaacca cgttgctacg
0141 cagcataaat ctgctggaac aacccgaagc gggaacgatc accgttggcg atatcactat tgatactgca
0211 cgttcattaa gtcagcaaaa atctctgatt cgccagttgc gtcagcacgt cgggtttgtc ttccagaact
0281 ttaatttgtt tccgcatcgt acggtgctgg agaacattat tgaagggccg gtgatcgtca aaggtgaacc
0351 gaaagaagag gccacggcgc gcgctcgcga gctgctggca aaagttgggc tggcaggtaa agaaaccagc
0421 tatccacgtc gtttgtctgg cggtcaacag cagcgtgttg cgattgcgcg tgcgctggca atgcgtcctg
0491 aggtgatttt gtttgacgag ccaacgtcag cgctggatcc agagctggtg ggtgaagtcc tgaacaccat
0561 ccgtcagctg gcgcaggaaa agcgcacgat ggtgattgtg acgcacgaaa tgagctttgc ccgggatgtt
0631 gcggaccggg cgatctttat ggaccagggg cggatagtcg agcagggggc cgcaaaagcg ttatttgccg
0701 accccgagca gcctcgcacc cgccagttcc tcgagaagtt tctgctgcaa taataagaaa aaatcagccc
0771 cgacgattca cctgtcgggg ctggacgcca tttcaagcct gataaaactg cttaacaaat cagcataact
0841 cattaataac ata
|
