MG1655
W3110
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Gene Report : ynjD
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion DE(xthA-pncA)90  ,  LD3-17-1 (LD)  ,  OCL84,85-1 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  ynjD
Related strains
     Strains Search Search strains by gene name:  ynjD   Search strains by all related name:  ynjD b1756 ECK1754 JW5286 o217

General information  (Go to Linear View:)
 Gene Name ynjD  
 Alternative name b1756,ECK1754,JW5286,o217  
 Location, Length 1,836,771 - 1,837,424 (  +  ) ;   39.59 min ; 654 (bp) ,   217 (aa) Go to Linear View
 Product putative transporter subunit: ATP-binding component of ABC superfamily  
 Operon Name ydjXYZ-ynjABCD  
 Note putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm  
 Function putative transport; Not classified  
 Gene Ontology GO:0000166 ; nucleotide binding ( ynjD )
GO:0005524 ; ATP binding ( ynjD )
GO:0006810 ; transport ( ynjD )
GO:0016887 ; ATPase activity ( ynjD )
GO:0017111 ; nucleoside-triphosphatase activity ( ynjD )
 PID 1788053  
 EC number
  (KEGG Pathway)   		 
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) MALK_ECOLI ( P02914 ; Q47348 )
    -  Protein name Maltose/maltodextrin transport ATP-binding protein malK.  
    -  Synonyms  
    -  Gene name Name=malK; OrderedLocusNames=b4035, z5633, ECs5018;  

 Linear View (Whole Mode)
View Location
   1825.0  –  1850.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP ynjD (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Crystal Structure Of The Atp-Binding Cassette Of Multisugar Transporter From Pyrococcus Horikoshii Ot3 Complexed With Atp  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Hypothetical ABC transporter ATP-binding protein ynjD  
         PSI-BLAST Phosphate import ATP-binding protein pstB
    nr     (database updated : 2007.02.20 )
         BLAST predicted transporter subunit: ATP-binding component of ABC superfamily [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    GLYCOSAMINOGLYCAN    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    ATP_GTP_A    ABC_TRANSPORTER     

Other Cross-Reference
    COG COG4136R 
    EcoCyc ynjD 

Sequences
Amino acid
FASTA format 
0001 MLCVKNVSLR LPESRLLTNV NFTVDKGDIV TLMGPSGCGK STLFSWMIGA LAEQFSCTGE LWLNEQRIDI 
0071 LPTAQRQIGI LFQDALLFDQ FSVGQNLLLA LPATLKGNAR RNAVNDALER SGLEGAFHQD PATLSGGQRA 
0141 RVALLRALLA QPKALLLDEP FSRLDVALRD NFRQWVFSEV RALAIPVVQV THDLQDVPAD SSVLDMAQWS 
0211 ENYNKLR
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             CCGCCCAGGC TTTATGGCAA CTGCTATTAC 
-070 CGCTTATTAT TTTTGCCCTG ACCGCGTTAG TCGCAAAATG GGTAGGTTAT GTCAGACAAG GACTCCGCTA 
0001 atgctctgcg tgaaaaatgt ttcgctacgt ttaccagaaa gccgcttgct gacaaacgtt aactttacgg 
0071 tggataaagg tgacattgtc acgttaatgg ggccgtctgg ctgtggaaaa tccactctgt tttcatggat 
0141 gattggtgca ctggccgaac agttttcttg tacaggtgag ctatggctca atgagcaacg gattgacatc 
0211 ctacccaccg cacagcgtca gattggcatt ctttttcagg atgcactgtt atttgaccag ttcagtgtcg 
0281 ggcaaaattt actgctggcg ctaccggcga cacttaaagg gaatgcccga cgtaatgccg tgaatgatgc 
0351 acttgagcgt tcaggccttg agggagcttt ccatcaggat cctgccactt tgtctggcgg tcagcgagcg 
0421 cgcgttgctc tactacgcgc ccttctcgcc caaccaaaag cgttactcct ggatgagcca ttcagccgtc 
0491 ttgatgtggc tctgcgcgat aattttcgcc agtgggtgtt cagcgaagtt cgcgccctgg cgatccccgt 
0561 cgttcaggta acgcacgatc tccaggatgt tcctgctgat agttctgttc tggatatggc gcagtggtca 
0631 gaaaattaca acaaactgcg ataaCGCAAA GTTTTTCTCA ATGCGTCAGT TCAGAATGGC GCACTCAAAA 
0701 CTACAATGTC GGGATTTTCG ATGAAACGTG TTTCTCAAAT GACCGCGCTG GCAA