|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ydfG
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ydfG
Search strains by all related name:
ydfG b1539 ECK1532 JW1532
|
General information (Go to Linear View: )
|
|
Gene Name
|
ydfG
|
|
Alternative name
|
b1539,ECK1532,JW1532
|
|
Location, Length
|
1,625,541 - 1,626,287
(
+
)
;
35.04
min
;
747
(bp) ,
248
(aa)
|
|
Product
|
malonic semialdehyde reductase, NADPH-dependent; L-allo-threonine dehydrogenase, NAD(P)-dependent; also oxidizes L-serine, D-serine, D-threonine and 3-hydroxyisobutyrate
|
|
Operon Name
|
ydfG
|
|
Note
|
putative oxidoreductase
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( ydfG )
GO:0005488
;
binding ( ydfG )
GO:0008152
;
metabolic process ( ydfG )
GO:0016491
;
oxidoreductase activity ( ydfG )
|
|
PID
|
1787820
|
EC number
(KEGG Pathway)
|
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
ydfG
(
EG12345
)
|
|
Number of removed
|
0 aa cleaved
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YDFG_ECOLI
(
P39831
;
P77149; P78161; P78162
)
|
|
- Protein name
|
Probable oxidoreductase ydfG
|
|
- Synonyms
|
EC 1.-.-.-
|
|
- Gene name
|
Name=ydfG; OrderedLocusNames=b1539;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ydfG
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG
|
|
PSI-BLAST
|
3-oxoacyl-[acyl-carrier-protein] reductase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
L-allo-threonine dehydrogenase, NAD(P)-binding [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
ADH_SHORT
|
| Sequences |
Amino acid
FASTA format
|
0001 MIVLVTGATA GFGECITRRF IQQGHKVIAT GRRQERLQEL KDELGDNLYI AQLDVRNRAA IEEMLASLPA
0071 EWCNIDILVN NAGLALGMEP AHKASVEDWE TMIDTNNKGL VYMTRAVLPG MVERNHGHII NIGSTAGSWP
0141 YAGGNVYGAT KAFVRQFSLN LRTDLHGTAV RVTDIEPGLV GGTEFSNVRF KGDDGKAEKT YQNTVALTPE
0211 DVSEAVWWVS TLPAHVNINT LEMMPVTQSY AGLNVHRQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCTTACTGAT AACGGAGTGC AATCTTGCAA
-070 TCCAGTATTA CCCGCTCTTA AGCATCCCGT GCTATGTTAT TGACACACAA AAGCGTTGAG GAACAGTGAG
0001 atgatcgttt tagtaactgg agcaacggca ggttttggtg aatgcattac tcgtcgtttt attcaacaag
0071 ggcataaagt tatcgccact ggccgtcgcc aggaacggtt gcaggagtta aaagacgaac tgggagataa
0141 tctgtatatc gcccaactgg acgttcgcaa ccgcgccgct attgaagaga tgctggcatc gcttcctgcc
0211 gagtggtgca atattgatat cctggtaaat aatgccggcc tggcgttggg catggagcct gcgcataaag
0281 ccagcgttga agactgggaa acgatgattg ataccaacaa caaaggcctg gtatatatga cgcgcgccgt
0351 cttaccgggt atggttgaac gtaatcatgg tcatattatt aacattggct caacggcagg tagctggccg
0421 tatgccggtg gtaacgttta cggtgcgacg aaagcgtttg ttcgtcagtt tagcctgaat ctgcgtacgg
0491 atctgcatgg tacggcggtg cgcgtcaccg acatcgaacc gggtctggtg ggtggtaccg agttttccaa
0561 tgtccgcttt aaaggcgatg acggtaaagc agaaaaaacc tatcaaaata ccgttgcatt gacgccagaa
0631 gatgtcagcg aagccgtctg gtgggtgtca acgctgcctg ctcacgtcaa tatcaatacc ctggaaatga
0701 tgccggttac ccaaagctat gccggactga atgtccaccg tcagtaaTTT TTATACCCGG CGTAACTGCC
0771 GGGTTATTGC TTGTCACAAA AAAGTGGTAG ACTCATGCAG TTAACTCACT CACAAGCAAG AACGAATGAC
0841 CGTCGAA
|
