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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ddpC
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
ddpC
Search strains by all related name:
ddpC b1485 ECK1479 f298 f298c JW1480 yddQ
|
General information (Go to Linear View: )
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Gene Name
|
ddpC
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Alternative name
|
b1485,ECK1479,f298,f298c,JW1480,yddQ
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Location, Length
|
1,557,038 - 1,557,934
(
-
)
;
33.56
min
;
897
(bp) ,
298
(aa)
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Product
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D-ala-D-ala transporter subunit
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Operon Name
|
ddpXABCDF
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Note
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membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
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Function
|
putative transport; Not classified
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Gene Ontology
|
GO:0005215
;
transporter activity ( ddpC )
GO:0005886
;
plasma membrane ( ddpC )
GO:0006810
;
transport ( ddpC )
GO:0006857
;
oligopeptide transport ( ddpC )
GO:0015031
;
protein transport ( ddpC )
GO:0015198
;
oligopeptide transporter activity ( ddpC )
GO:0016020
;
membrane ( ddpC )
GO:0016021
;
integral to membrane ( ddpC )
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PID
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1787760
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
YDDQ_ECOLI
(
P77463
)
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- Protein name
|
Hypothetical ABC transporter permease protein yddQ.
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- Synonyms
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- Gene name
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Name=yddQ; OrderedLocusNames=b1485;
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| Sequences |
Amino acid
FASTA format
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0001 MMLSEETSAV RPQKQTRFNG AKLVWMLKGS PLTVTSAVII VLMLLMMIFS PWLATHDPNA IDLTARLLPP
0071 SAAHWFGTDE VGRDLFSRVL VGSQQSILAG LVVVAIAGMI GSLLGCLSGV LGGRADAIIM RIMDIMLSIP
0141 SLVLTMALAA ALGPSLFNAM LAIAIVRIPF YVRLARGQAL VVRQYTYVQA AKTFGASRWH LINWHILRNS
0211 LPPLIVQASL DIGSAILMAA TLGFIGLGAQ QPSAEWGAMV ANGRNYVLDQ WWYCAFPGAA ILLTAVGFNL
0281 FGDGIRDLLD PKAGGKQS
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gctttgccgt cgtggtttca tttgcttatg
-070 tgctggtcaa cctggtggtg gatttgctct atttgtggat tgatccgcgt atcggacgtg gaggtggtga
0001 atgatgctaa gcgaggaaac gtccgccgta cgcccacaaa aacaaacgcg atttaacggt gcaaaactgg
0071 tatggatgct gaaaggcagt ccgctcaccg tgaccagcgc agtcatcatt gtattaatgc tattgatgat
0141 gattttttca ccgtggctgg cgacgcatga tcccaacgcc attgatttaa ccgcccgcct tttgccgcct
0211 tctgcggcgc actggtttgg caccgatgaa gtgggacgcg atctgtttag ccgcgtactg gtcggcagtc
0281 agcaatcaat tctcgccgga ttagtcgtgg ttgccattgc gggtatgatt ggttcgctac tcggatgtct
0351 atccggtgtg cttggtggac gcgcagacgc catcatcatg cgcatcatgg acattatgct gtcgattcct
0421 tcgttggtac tgacaatggc actggctgcc gctctcgggc cgagtttgtt taacgccatg ctggctattg
0491 ctattgtgcg aattcccttt tatgtgcgcc tggcgcgggg gcaagcatta gttgtacgcc agtataccta
0561 tgttcaggcg gcgaaaacct ttggcgcgtc tcgttggcat ctgatcaact ggcatatttt acgtaactcc
0631 ctaccgccgc tgatcgtgca ggcatcgctg gatatcggta gcgcgatttt aatggccgcc acgttgggat
0701 ttattggcct gggtgctcaa caaccgagtg ctgaatgggg cgcgatggta gcaaatggtc gcaactatgt
0771 actcgatcag tggtggtatt gcgcatttcc gggggcagcg attttgctta ccgccgtcgg gtttaatctc
0841 tttggtgatg gtattcgcga tctgcttgac ccgaaagcag gaggaaagca gtcatgaccc aacccgttct
0911 ggacattcaa caactgcatt tgagtttccc cggttttaac ggtgatgttc acgcgctcaa caatgtgtcc
0981 ttgcagatta accgcgg
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