|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yddM
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yddM
Search strains by all related name:
yddM b1477 ECK1471 f120 JW5908
|
General information (Go to Linear View: )
|
|
Gene Name
|
yddM
|
|
Alternative name
|
b1477,ECK1471,f120,JW5908
|
|
Location, Length
|
1,550,422 - 1,550,706
(
-
)
;
33.42
min
;
285
(bp) ,
94
(aa)
|
|
Product
|
putative DNA-binding transcriptional regulator
|
|
Operon Name
|
yddM
|
|
Note
|
GO_process: GO:0006355 - regulation of transcription, DNA-dependent
|
|
Function
|
|
|
Gene Ontology
|
GO:0003677
;
DNA binding ( yddM )
GO:0006350
;
transcription ( yddM )
GO:0006355
;
regulation of transcription, DNA-dependent ( yddM )
GO:0043565
;
sequence-specific DNA binding ( yddM )
|
|
PID
|
145693133
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YDDM_ECOLI
(
P76125
)
|
|
- Protein name
|
Putative HTH-type transcriptional regulator yddM.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yddM; OrderedLocusNames=b1477, c1909;
|
| Sequences |
Amino acid
FASTA format
|
0001 MKMANHPRPG DIIQESLDEL NVSLREFARA MEIAPSTASR LLTGKAALTP EMAIKLSVVI GSSPQMWLNL
0071 QNAWSLAEAE KTVDVSRLRR LVTQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctctccaaca tgaaatggct aaatggatta
-070 ttgttgcgta ggaaggaaca ataatgatag tgttcccagt gaaggaacgc tactgagagt aaagacacta
0001 atgaaaatgg ccaatcatcc ccgcccgggg gacattattc aggaatcact ggacgaactt aatgtcagcc
0071 tgcgcgagtt tgccagagca atggaaattg ctccctcaac ggcaagccga ttgctgacag gaaaagcagc
0141 tttgacgcca gaaatggcga ttaaactttc cgtggtgatc ggcagttcgc cgcaaatgtg gctgaatctg
0211 caaaacgcct ggagtctggc agaggcagaa aaaacagtgg atgtgtcgcg attacgccgt ctggttacgc
0281 aataaaaaaa tggcacttta taaagcgcca tttagaactg atgacaaacg caacattgcc tgatgcgcta
0351 cgcttatcag gcctacacgt tcactgcaat ctatt
|
