|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
20
(LD)
,
OCR70
(D)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
sapF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
sapF
Search strains by all related name:
sapF b1290 ECK1285 JW1283
|
General information (Go to Linear View: )
|
|
Gene Name
|
sapF
|
|
Alternative name
|
b1290,ECK1285,JW1283
|
|
Location, Length
|
1,349,852 - 1,350,658
(
-
)
;
29.09
min
;
807
(bp) ,
268
(aa)
|
|
Product
|
antimicrobial peptide transport ABC system ATP-binding protein
|
|
Operon Name
|
sapABCDF
|
|
Note
|
putative ATP-binding protein of peptide transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0000166
;
nucleotide binding ( sapF )
GO:0005515
;
protein binding ( sapF )
GO:0005524
;
ATP binding ( sapF )
GO:0005622
;
intracellular ( sapF )
GO:0005886
;
plasma membrane ( sapF )
GO:0006810
;
transport ( sapF )
GO:0006857
;
oligopeptide transport ( sapF )
GO:0015031
;
protein transport ( sapF )
GO:0015198
;
oligopeptide transporter activity ( sapF )
GO:0016020
;
membrane ( sapF )
GO:0016887
;
ATPase activity ( sapF )
GO:0017111
;
nucleoside-triphosphatase activity ( sapF )
|
|
PID
|
1787547
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
SAPF_ECOLI
(
P36637
)
|
|
- Protein name
|
Peptide transport system ATP-binding protein sapF.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=sapF; OrderedLocusNames=b1290, c1767, SF1295, S1377;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
sapF
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain 1, Malk
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Peptide transport system ATP-binding protein sapF
|
|
PSI-BLAST
|
Phosphate import ATP-binding protein pstB
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted antimicrobial peptide transporter subunit [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
ATP_GTP_A
ABC_TRANSPORTER
|
|
MMBR References
|
EMBO J. 1994;13:3964-3972
A Salmonella protein that is required for resistance to antimicrobial peptides and transport of potassium.
Parra-Lopez, C., R. Lin, A. Aspedon, and E. A. Groisman.
|
| Sequences |
Amino acid
FASTA format
|
0001 MIETLLEVRN LSKTFRYRTG WFRRQTVEAV KPLSFTLREG QTLAIIGENG SGKSTLAKML AGMIEPTSGE
0071 LLIDDHPLHF GDYSFRSQRI RMIFQDPSTS LNPRQRISQI LDFPLRLNTD LEPEQRRKQI IETMRMVGLL
0141 PDHVSYYPHM LAPGQKQRLG LARALILRPK VIIADEALAS LDMSMRSQLI NLMLELQEKQ GISYIYVTQH
0211 IGMMKHISDQ VLVMHQGEVV ERGSTADVLA SPLHELTKRL IAGHFGEALT ADAWRKDR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ccgtatgcac aacgagaatg cattgtgacg
-070 ccacgtttga cgggggcgaa aaatcatctc tatgcctgtc atttcccgct gaacatggag aaagagtgag
0001 atgatcgaaa cgctgcttga agtgcgtaat ttaagtaaaa cgttccgcta ccggaccggc tggtttcgtc
0071 gtcagaccgt agaagcggta aaacccttga gctttacgct acgtgaaggc cagacactgg cgattattgg
0141 cgagaatggt tcgggtaaat ccacgctggc aaaaatgctg gcgggaatga tagagcctac cagcggcgag
0211 ttattgattg acgatcatcc actgcatttt ggcgattatt ccttccgcag tcagcgtatt cgcatgattt
0281 ttcaggatcc ttcgacctcg ttgaatcccc gtcaacgtat ctcgcaaatt ctggattttc cactgcgcct
0351 gaacaccgac ctggaaccgg aacagcgtcg caaacagatt attgaaacga tgcgtatggt tgggctgcta
0421 ccggatcacg tcagttacta tccgcatatg ttggcacccg gacaaaaaca gcgtctgggt ctggcgcgcg
0491 cgctgatatt gcgcccaaaa gtcattattg ccgatgaagc cctcgcttca ctggatatgt cgatgcgttc
0561 gcagttgatt aatctgatgc tggaattaca ggaaaaacag ggcatttcgt atatttatgt tacccagcat
0631 atcggaatga tgaagcacat tagcgaccag gtgctggtga tgcatcaggg cgaggttgtc gagcgaggca
0701 gcaccgcgga tgtgctggca tcgccgctgc atgaactcac caaacggctg attgccggtc attttggcga
0771 ggcattgacg gcggatgcgt ggcgtaaaga tcgctaattt tctgaatcct ccttccagat tattcacctc
0841 attctgacaa aagattaaat cttgtcagaa tgaggtgata gataaaatta aatcaaatgc gcgtgat
|
