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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Mol Microbiol. 1995;16(3):521-34.
Transcriptional regulation of the proton translocating NADH dehydrogenase genes (nuoA-N) of Escherichia coli by electron acceptors, electron donors and gene regulators.
Bongaerts J, Zoske S, Weidner U, Unden G.
(
7565112
)
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Deletion
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OCL66
(D)
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
lrhA
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Related strains
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Strains Search
|
Search strains by gene name:
lrhA
Search strains by all related name:
lrhA b2289 ECK2283 f312 genR hexA JW2284
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General information (Go to Linear View: )
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Gene Name
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lrhA
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Alternative name
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b2289,ECK2283,f312,genR,hexA,JW2284
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Location, Length
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2,403,725 - 2,404,663
(
-
)
;
51.81
min
;
939
(bp) ,
312
(aa)
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Product
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DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes
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Operon Name
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lrhA
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Note
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GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0006350 - transcription
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Function
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regulator; Energy metabolism, carbon: Aerobic respiration
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Gene Ontology
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GO:0003677
;
DNA binding ( lrhA )
GO:0003700
;
transcription factor activity ( lrhA )
GO:0006350
;
transcription ( lrhA )
GO:0006355
;
regulation of transcription, DNA-dependent ( lrhA )
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PID
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1788626
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
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LRHA_ECOLI
(
P36771
;
P76490; P76934
)
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- Protein name
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Probable HTH-type transcriptional regulator lrhA.
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- Synonyms
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- Gene name
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Name=lrhA; Synonyms=genR; OrderedLocusNames=b2289;
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MMBR References
|
Mol Microbiol. 1995;16(3):521-34.
Transcriptional regulation of the proton translocating NADH dehydrogenase genes (nuoA-N) of Escherichia coli by electron acceptors, electron donors and gene regulators.
Bongaerts J, Zoske S, Weidner U, Unden G.
(
7565112
)
|
| Sequences |
Amino acid
FASTA format
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0001 MISANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR HGRNKLLTEH
0071 GIQLLGYARK ILRFNDEACS SLMFSNLQGV LTIGASDESA DTILPFLLNR VSSVYPKLAL DVRVKRNAYM
0141 AEMLESQEVD LMVTTHRPSA FKALNLRTSP THWYCAAEYI LQKGEPIPLV LLDDPSPFRD MVLATLNKAD
0211 IPWRLAYVAS TLPAVRAAVK AGLGVTARPV EMMSPDLRVL SGVDGLPPLP DTEYLLCYDP SSNNELAQVI
0281 YQAMESYHNP WQYSPMSAPE GDDSLLIERD IE
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cggatgaaac tgccagggag gcacattaca
-070 aatggaattg cttgtttgtg tgtgcacagc attaaccagc tcagtatgag ccgccagtaa gtgataatat
0001 atgataagtg caaatcgtcc gataattaac ctcgacctcg atctgctgag aacatttgtt gctgttgccg
0071 atctgaacac ttttgctgcc gcagctgccg ctgtgtgtcg tactcagtcc gccgtaagtc agcaaatgca
0141 gcgtctggaa caactcgttg ggaaagaact gttcgctcgt cacggtcgca acaaactgtt aactgaacat
0211 ggcattcaac ttcttggtta cgccaggaaa atcctgcgtt ttaatgatga ggcctgctca tcattaatgt
0281 tcagtaatct tcagggcgta ttaactatcg gtgcttcaga tgaatctgcc gatacgatct tacctttcct
0351 gttaaatcgc gtgagttcgg tttatccgaa attagcgctg gatgtccgcg ttaaacgtaa tgcctatatg
0421 gcagaaatgc tggaatccca ggaagtggat ttgatggtaa ccacccatcg tccttcagcg tttaaggcat
0491 tgaacctgcg tacctcgcca acacactggt actgcgcagc ggaatacata ttgcaaaaag gcgagccgat
0561 ccctcttgta ttgctggatg atcctagccc gtttcgcgat atggtgctgg cgacgcttaa taaagcagat
0631 attccatggc gactggctta tgtcgcctcg acgcttccgg ccgttcgtgc ggcagtgaaa gccggtcttg
0701 gcgtgacggc aaggccggtt gagatgatga gcccggacct gcgtgtgctg agtggagtag atggcttacc
0771 gccgctacct gataccgaat atttgctgtg ctatgatccg tccagtaata atgagctggc ccaggtgatc
0841 tatcaggcga tggagagcta ccataatccg tggcaataca gcccaatgtc tgctccggaa ggggatgatt
0911 cattgttgat tgaaagggat atcgagtaat cgacggacga tagataattc ctgagacaat agtgtaaaaa
0981 acgagccgct gggggtgttt taaaccccag cggctttttt ttagtaaaaa tccttcatc
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