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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
|
OCR55
(D)
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|
Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ssuC
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Related strains
|
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Strains Search
|
Search strains by gene name:
ssuC
Search strains by all related name:
ssuC b0934 ECK0925 f278 f278e JW5121 ycbM
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General information (Go to Linear View: )
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Gene Name
|
ssuC
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Alternative name
|
b0934,ECK0925,f278,f278e,JW5121,ycbM
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Location, Length
|
993,264 - 994,055
(
-
)
;
21.41
min
;
792
(bp) ,
263
(aa)
|
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Product
|
putative alkanesulfonate transporter subunit
|
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Operon Name
|
ssuEADCB
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Note
|
membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006793 - phosphorus metabolic process
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Function
|
putative transport; Not classified
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Gene Ontology
|
GO:0005215
;
transporter activity ( ssuC )
GO:0005886
;
plasma membrane ( ssuC )
GO:0006810
;
transport ( ssuC )
GO:0016020
;
membrane ( ssuC )
GO:0016021
;
integral to membrane ( ssuC )
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PID
|
87081802
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EC number
(KEGG Pathway)
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|
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
|
SSUC_ECOLI
(
P75851
)
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- Protein name
|
Putative aliphatic sulfonates transport permease protein ssuC.
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- Synonyms
|
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- Gene name
|
Name=ssuC; OrderedLocusNames=b0934;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
ssuC
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putative aliphatic sulfonates transport permease protein ssuC
|
|
PSI-BLAST
|
Putative aliphatic sulfonates transport permease protein ssuC
|
|
nr
(database updated :
2007.02.20
)
|
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BLAST
|
nitrate transport protein nrtB homolog ycbM - Escherichia coli
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
|
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PROSITE
|
GLYCOSAMINOGLYCAN
PKC_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MATPVKKWLL RVAPWFLPVG IVAVWQLASS VGWLSTRILP SPEGVVTAFW TLSASGELWQ HLAISSWRAL
0071 IGFSIGGSLG LILGLISGLS RWGERLLDTS IQMLRNVPHL ALIPLVILWF GIDESAKIFL VALGTLFPIY
0141 INTWHGIRNI DRGLVEMARS YGLSGIPLFI HVILPGALPS IMVGVRFALG LMWLTLIVAE TISANSGIGY
0211 LAMNAREFLQ TDVVVVAIIL YALLGKLADV SAQLLERLWL RWNPAYHLKE ATV
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 atcccggaaa ttccccagcc gcagccgctg
-070 aatccgcaag gcgaagcggt ggcgaatgat tttatccccc gtaaagtcgc gcaaagctaa ggaagaaata
0001 atggcaacgc cagtgaagaa gtggttattg cgcgttgccc cctggttttt accggtgggc atcgtggcgg
0071 tgtggcaact ggcctcctcg gttggctggc tgtcgacgcg tattttgcct tcaccggaag gagtggtgac
0141 ggcgttctgg acgctctccg ccagcggcga actgtggcag catctggcga tcagctcctg gcgggcgctg
0211 attggctttt caattggcgg atcgctgggg ttgattttgg gactgattag cgggctatct cgctggggag
0281 aacggctgct ggatacctca attcagatgt tgcgcaacgt gccgcatctg gcgctgatcc cgctggtgat
0351 tttgtggttt ggcattgatg aatccgcaaa aatctttctg gtggcgctcg gtacgctatt ccccatttat
0421 atcaacacct ggcatggcat ccgtaatatc gatcgcgggt tggtggagat ggcgcgtagc tatggattat
0491 ccggcatacc gctgtttatc catgtgatcc tgcctggtgc cctgccctca attatggtcg gcgtgcgttt
0561 tgcgttgggc ctgatgtggc tgacgctgat tgttgccgaa accatttctg ccaattcagg cattggttat
0631 ctggcgatga atgcgcggga gtttttgcaa acggacgtgg tggtagtcgc tattattctt tacgccctgc
0701 tcggcaaact ggctgacgtc agcgcgcagc tgttagagcg cctctggttg cgctggaacc cggcttatca
0771 tttgaaggag gccacggtat gaatactgct cgtctgaacc agggcacgcc attgttgctc aatgcagtaa
0841 gcaaacatta cgcggaaaat atcgtcctga accaactgga tttacatatt cc
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