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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ydcV
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ydcV
Search strains by all related name:
ydcV b1443 ECK1437 JW1438 o264
|
General information (Go to Linear View: )
|
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Gene Name
|
ydcV
|
|
Alternative name
|
b1443,ECK1437,JW1438,o264
|
|
Location, Length
|
1,512,786 - 1,513,580
(
+
)
;
32.61
min
;
795
(bp) ,
264
(aa)
|
|
Product
|
putative spermidine/putrescine transporter subunit
|
|
Operon Name
|
ydcSTUV
|
|
Note
|
membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( ydcV )
GO:0005886
;
plasma membrane ( ydcV )
GO:0006810
;
transport ( ydcV )
GO:0016020
;
membrane ( ydcV )
GO:0016021
;
integral to membrane ( ydcV )
|
|
PID
|
1787714
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YDCV_ECOLI
(
P77505
)
|
|
- Protein name
|
Hypothetical ABC transporter permease protein ydcV.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ydcV; OrderedLocusNames=b1443, SF1774.1, S1906;
|
| Sequences |
Amino acid
FASTA format
|
0001 MHSERAPFFL KLAAWGGVVF LHFPILIIAA YAFNTEDAAF SFPPQGLTLR WFSVAAQRSD ILDAVTLSLK
0071 VAALATLIAL VLGTLAAAAL WRRDFFGKNA ISLLLLLPIA LPGIVTGLAL LTAFKTINLE PGFFTIVVGH
0141 ATFCVVVVFN NVIARFRRTS WSLVEASMDL GANGWQTFRY VVLPNLSSAL LAGGMLAFAL SFDEIIVTTF
0211 TAGHERTLPL WLLNQLGRPR DVPVTNVVAL LVMLVTTLPI LGAWWLTREG DNGQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GGGGCGATTG GCAATATGCC GATGGCGGCG
-070 GCATTCACCC TGGTGCCGAT TATTCTCATC GCACTGTACC TGGCGTTCGT GAAACGTCTG GGAGCGTTCG
0001 atgcactctg aacgcgcacc gtttttcctc aaactggcgg cctggggcgg cgttgttttc ctacattttc
0071 ccatcctgat aatcgccgcc tatgcgttta acactgaaga tgcggcgttt agttttccac cgcagggcct
0141 gacgctgcgc tggtttagcg tggcagcaca gcgtagtgat attcttgatg ccgtgacact gtcacttaaa
0211 gtggcggcgc tggcgacatt aattgcgctg gtgttaggga cgctggcagc tgccgcgctg tggcgacgag
0281 actttttcgg caaaaacgcc atttcgctgt tactgctgct gcccattgcg ctgccgggca ttgtcactgg
0351 tctggcgtta ttaaccgcct ttaaaaccat caatctggag ccgggatttt tcaccatcgt ggtcggtcat
0421 gcgacttttt gtgtagttgt ggtgtttaac aatgtcatcg cccgttttcg ccgcacctcc tggagtctgg
0491 ttgaggcgtc aatggatctt ggggccaatg gctggcaaac cttccgctac gtagtgttgc cgaatctcag
0561 ttcggcgtta ctggcaggag gaatgctggc gtttgccttg tcgttcgatg aaatcatcgt tacgaccttt
0631 acggcaggtc atgaacgaac gttaccgttg tggttgctca atcagcttgg gcgaccgcgt gatgtaccgg
0701 taactaacgt ggtggcactg ctggttatgt tggtaacaac cttgccgatc ctgggggcct ggtggctaac
0771 ccgcgaaggc gacaatggtc aataaCCACT GATACAGGAA TATGCTATGC AACATAAGTT ACTGATTAAC
0841 GGAGAACTGG TTAGCGGCGA AGGGGAAAAA CAGCCTGTCT ATAATCCGGC AACGG
|
