|
|
Symbol |
|
|
|
|
|
P-II
|
glnB, glnK |
2 |
PF00543.18 |
Bateman A |
Nitrogen regulatory protein P-II |
|
P22_Cro
|
dicC |
1 |
PF14549.2 |
Coggill P |
DNA-binding transcriptional regulator .. |
|
P5CR_dimer
|
proC |
1 |
PF14748.2 |
Eberhardt R |
Pyrroline-5-carboxylate reductase dime.. |
|
PaaA_PaaC
|
paaA, paaC |
2 |
PF05138.8 |
Bateman A |
Phenylacetic acid catabolic protein |
|
PaaB
|
paaB |
1 |
PF06243.7 |
Finn RD |
Phenylacetic acid degradation B |
|
PaaX
|
paaX |
1 |
PF07848.8 |
Fenech M |
PaaX-like protein |
|
PaaX_C
|
paaX |
1 |
PF08223.7 |
Fenech M |
PaaX-like protein C-terminal domain |
|
PadR
|
yqjI |
1 |
PF03551.10 |
Bateman A |
Transcriptional regulator PadR-like fa.. |
|
PagP
|
pagP |
1 |
PF07017.7 |
Moxon SJ |
Antimicrobial peptide resistance and l.. |
|
Paired_CXXCH_1
|
nrfB |
1 |
PF09699.6 |
TIGRFAMs, Coggill P |
Doubled CXXCH motif (Paired_CXXCH_1) |
|
PALP
|
cysK, cysM, dcyD, dsdA, ilvA, tdcB, thrC, trpB, ygeX |
9 |
PF00291.21 |
Bateman A, Finn RD |
Pyridoxal-phosphate dependent enzyme |
|
Pantoate_ligase
|
panC |
1 |
PF02569.11 |
Mian N, Bateman A |
Pantoate-beta-alanine ligase |
|
Pantoate_transf
|
panB |
1 |
PF02548.11 |
Mian N, Bateman A |
Ketopantoate hydroxymethyltransferase |
|
PAP2
|
lpxT, pgpB, ybjG |
3 |
PF01569.17 |
Bashton M, Bateman A |
PAP2 superfamily |
|
PAP2_3
|
ynbD |
1 |
PF14378.2 |
Coggill P |
PAP2 superfamily |
|
PapC_C
|
elfC, fimD, htrE, sfmD, ybgQ, yehB, yhcD, yraJ |
8 |
PF13953.2 |
Bateman A |
PapC C-terminal domain |
|
PapC_N
|
elfC, fimD, htrE, sfmD, ybgQ, yehB, yhcD, yraJ |
8 |
PF13954.2 |
Bateman A |
PapC N-terminal domain |
|
PapD_C
|
elfD, fimC, sfmC, yadV, ybgP, ycbF, yehC, yfcS, yqiH, yraI |
10 |
PF02753.13 |
Finn RD, Griffiths-Jones SR |
Pili assembly chaperone PapD, C-termin.. |
|
PapD_N
|
elfD, fimC, sfmC, yadV, ybgP, ycbF, yehC, yfcS, yhcA, yqiH, yraI |
11 |
PF00345.16 |
Finn RD, Griffiths-Jones SR |
Pili and flagellar-assembly chaperone,.. |
|
PAPS_reduct
|
cysD, cysH, ybdN |
3 |
PF01507.15 |
Bashton M, Bateman A |
Phosphoadenosine phosphosulfate reduct.. |
|
ParA
|
mrp |
1 |
PF10609.5 |
Mistry J, Wood V |
NUBPL iron-transfer P-loop NTPase |
|
ParBc
|
ybdM, ynaK |
2 |
PF02195.14 |
SMART |
ParB-like nuclease domain |
|
ParE_toxin
|
relE |
1 |
PF05016.10 |
Bateman A |
ParE toxin of type II toxin-antitoxin .. |
|
PAS
|
arcB, atoS, dcuS, dhaR, dpiB, glnL, phoR |
7 |
PF00989.20 |
Bateman A |
PAS fold |
|
PAS_3
|
aer, yegE |
2 |
PF08447.7 |
Bateman A |
PAS fold |
|
PAS_4
|
ydaM, yegE |
2 |
PF08448.6 |
Bateman A |
PAS fold |
|
PAS_6
|
yheO |
1 |
PF08348.7 |
Fenech M |
YheO-like PAS domain |
|
PAS_8
|
tyrR, ygeV |
2 |
PF13188.2 |
Bateman A |
PAS domain |
|
PAS_9
|
dosP, gmr, yegE |
4 |
PF13426.2 |
Bateman A |
PAS domain |
|
Patatin
|
rssA, yjjU |
2 |
PF01734.18 |
Bashton M, Bateman A, Dlakic M |
Patatin-like phospholipase |
|
PBP
|
ybcL, ybhB |
2 |
PF01161.16 |
Finn RD, Bateman A |
Phosphatidylethanolamine-binding protein |
|
PBP1_TM
|
mrcB |
1 |
PF14812.2 |
Coggill P |
Transmembrane domain of transglycosyla.. |
|
PBP5_C
|
dacA, dacC, dacD |
3 |
PF07943.9 |
Fenech M |
Penicillin-binding protein 5, C-termin.. |
|
PBP_dimer
|
ftsI, mrdA |
2 |
PF03717.11 |
Yeats C |
Penicillin-binding Protein dimerisatio.. |
|
PBP_like_2
|
pstS |
1 |
PF12849.3 |
Bateman A |
PBP superfamily domain |
|
PCB_OB
|
mrcA |
1 |
PF17092.1 |
Eberhardt R |
Penicillin-binding protein OB-like dom.. |
|
PCMT
|
pcm |
1 |
PF01135.15 |
Finn RD, Bateman A |
Protein-L-isoaspartate(D-aspartate) O-.. |
|
PCRF
|
prfA, prfB |
2 |
PF03462.14 |
Dlakic M |
PCRF domain |
|
PD40
|
tolB, yidR |
5 |
PF07676.8 |
Yeats C, Mistry J, Adindla S |
WD40-like Beta Propeller Repeat |
|
PDDEXK_1
|
recB |
1 |
PF12705.3 |
Bateman A |
PD-(D/E)XK nuclease superfamily |
|
PDH
|
tyrA |
1 |
PF02153.13 |
Bateman A |
Prephenate dehydrogenase |
|
PDT
|
pheA |
1 |
PF00800.14 |
Bateman A |
Prephenate dehydratase |
|
PduV-EutP
|
eutP |
1 |
PF10662.5 |
FIGfam, Mistry J, Coggill P |
Ethanolamine utilisation - propanediol.. |
|
PdxA
|
pdxA |
1 |
PF04166.8 |
TIGRFAMs, Finn RD |
Pyridoxal phosphate biosynthetic prote.. |
|
PdxJ
|
pdxJ |
1 |
PF03740.9 |
Bateman A |
Pyridoxal phosphate biosynthesis prote.. |
|
PDZ
|
degP, degQ, prc, rseP |
5 |
PF00595.20 |
Bateman A |
PDZ domain (Also known as DHR or GLGF) |
|
PDZ_2
|
degQ, degS |
2 |
PF13180.2 |
Bateman A |
PDZ domain |
|
Pectinesterase
|
ybhC |
1 |
PF01095.15 |
Finn RD, Bateman A |
Pectinesterase |
|
PemK_toxin
|
chpB, mazF |
2 |
PF02452.13 |
Mian N, Bateman A |
PemK-like, MazF-like toxin of type II .. |
|
Pentapeptide
|
yjcF |
2 |
PF00805.18 |
Bateman A |
Pentapeptide repeats (8 copies) |
Total Hit : 
