PEC Original Annotations
|
Essentiality
|
Class
|
non-essential
|
References (PMID)
|
|
Deletion
|
LD3-5-1
(LD)
,
OCL76
(D)
|
Related gene (W3110 PEC)
|
Gene Search
|
Search MG1655 PEC by gene name:
yedY
|
Related strains
|
Strains Search
|
Search strains by gene name:
yedY
Search strains by all related name:
yedY b1971 ECK1967 JW1954 o334 o334a
|
General information (Go to Linear View:)
|
Gene Name
|
yedY
|
Alternative name
|
b1971,ECK1967,JW1954,o334,o334a
|
Location, Length
|
2,037,502 - 2,038,506
(
+
)
;
43.91
min
;
1005
(bp) ,
334
(aa)
|
Product
|
membrane-anchored, periplasmic TMAO, DMSO reductase
|
Operon Name
|
yedYZ
|
Note
|
putative reductase
|
Function
|
putative enzyme; Not classified
|
Gene Ontology
|
GO:0006118
;
electron transport ( yedY )
|
PID
|
1788282
|
EC number
(KEGG Pathway)
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YEDY_ECOLI
(
P76342
)
|
- Protein name
|
Hypothetical UPF0190 protein yedY.
|
- Synonyms
|
|
- Gene name
|
Name=yedY; OrderedLocusNames=b1971;
|
Homology Analysis
|
BLAST
|
Bacteria
|
GTOP
|
yedY
(
homologous genes of other bacterias
)
|
PDB
(database updated :
2007.02.20
)
|
PSI-BLAST
|
Chain A, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase
|
SWISS-PROT
(database updated :
2007.02.20
)
|
BLAST
|
UPF0190 protein yedY
|
PSI-BLAST
|
UPF0190 protein yedY
|
nr
(database updated :
2007.02.20
)
|
BLAST
|
hypothetical protein b1971 [Escherichia coli K12]
|
Pfam 28.0
(database updated :
2015-05
)
|
Pfam
|
|
PROSITE
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
Sequences |
Amino acid
FASTA format
|
0001 MKKNQFLKES DVTAESVFFM KRRQVLKALG ISATALSLPH AAHADLLSWF KGNDRPPAPA GKALEFSKPA
0071 AWQNNLPLTP ADKVSGYNNF YEFGLDKADP AANAGSLKTD PWTLKISGEV AKPLTLDHDD LTRRFPLEER
0141 IYRMRCVEAW SMVVPWIGFP LHKLLALAEP TSNAKYVAFE TIYAPEQMPG QQDRFIGGGL KYPYVEGLRL
0211 DEAMHPLTLM TVGVYGKALP PQNGAPVRLI VPWKYGFKGI KSIVSIKLTR ERPPTTWNLA APDEYGFYAN
0281 VNPYVDHPRW SQATERFIGS GGILDVQRQP TLLFNGYAAQ VASLYRGLDL RENF
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TATGTAAAAG CAGATCTCTG CTACTGTTAG
-070 GGAGGACACT CCCTGACAGA TTAACAGTAA ACGGCTCTTG CTGGCTAACG ACAAAAAAGT GTGATGGCTT
0001 atgaaaaaga atcaattttt aaaagaatca gatgttacgg ccgagtcggt attctttatg aagcgtcggc
0071 aggtgttaaa agcactgggc atcagtgcaa ctgcactttc tttgcctcac gctgcgcatg ccgatctgct
0141 tagctggttt aaagggaacg atcgcccgcc cgcccccgcc ggaaaagcgc tggagttcag caagcctgcc
0211 gcctggcaaa ataacctgcc actgacgcca gcagataaag tttccggtta taataacttc tatgaattcg
0281 ggctggataa agccgatccc gccgctaatg ctggtagcct gaaaaccgat ccatggacac tgaaaatcag
0351 cggcgaagtg gcaaaaccat tgaccctcga tcatgatgac ttaacccgtc gcttcccgct ggaagagcgt
0421 atttatcgta tgcgctgcgt ggaagcgtgg tcgatggtgg tgccgtggat tggttttccg ctgcacaaat
0491 tgctggcgct tgccgaacct accagcaatg cgaagtatgt cgctttcgaa acaatttatg caccggaaca
0561 gatgccaggc cagcaggacc gctttatcgg cggtgggctg aaatatcctt atgtcgaagg attgcgtctc
0631 gacgaagcaa tgcatccgct cacactgatg accgtaggtg tttatggcaa ggcgttaccg ccacaaaatg
0701 gcgcgccggt gcgactgatt gtgccgtgga aatatggctt taaagggatt aaatcgatag tcagtattaa
0771 gctgacccgc gagcgtccgc caaccacctg gaatctggca gcgcctgacg aatacggttt ttacgccaac
0841 gttaatccgt atgttgatca cccgcgctgg tcacaggcta ccgaacgatt tattggttca ggcggcatcc
0911 tcgatgtaca gcgccagcca acgctactgt ttaatggtta cgccgcccag gtggcatcgc tgtatcgtgg
0981 cctggatttg cgggagaatt tctaaATGCG TCTGACAGCA AAACAGGTGA CATGGCTGAA AGTTTGCCTG
1051 CATCTTGCCG GATTGTTGCC GTTTCTCTGG CTGGTCTGGG CGATCAATCA CGGTG
|