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PEC Original Annotations
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Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Mol Microbiol. 1996;20(6):1297-306.
An unorthodox sensor protein (TorS) mediates the induction of the tor structural genes in response to trimethylamine N-oxide in Escherichia coli.
Jourlin C, Bengrine A, Chippaux M, Mejean V.
(
8809780
)
|
|
|
Deletion
|
17
(LD)
,
OCR57
(D)
,
OCR57,60-3 (LD 17C_CRS)
(D)
,
OCR57,60-4 (LD 17C_P/O)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
torT
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
torT
Search strains by all related name:
torT b0994 ECK0985 JW0979 yccH
|
General information (Go to Linear View: )
|
|
Gene Name
|
torT
|
|
Alternative name
|
b0994,ECK0985,JW0979,yccH
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|
Location, Length
|
1,055,484 - 1,056,512
(
+
)
;
22.75
min
;
1029
(bp) ,
342
(aa)
|
|
Product
|
periplasmic sensory protein associated with the TorRS two-component regulatory system
|
|
Operon Name
|
torT
|
|
Note
|
part of regulation of tor operon, periplasmic; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process
|
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Function
|
regulator; Energy metabolism, carbon: Anaerobic respiration
|
|
Gene Ontology
|
GO:0006810
;
transport ( torT )
GO:0042597
;
periplasmic space ( torT )
|
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PID
|
1787228
|
EC number
(KEGG Pathway)
|
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
torT
(
EG12616
)
|
|
Number of removed
|
18 aa cleaved
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
TORT_ECOLI
(
P38683
;
P75888
)
|
|
- Protein name
|
Periplasmic protein torT precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=torT; OrderedLocusNames=b0994;
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MMBR References
|
J Bacteriol. 1996;178:1219-1223
The periplasmic TorT protein is required for trimethylamine N-oxide reductase gene induction in Escherichia coli.
Jourlin, C., G. Simon, J. Pommier, M. Chippaux, and V. Mejean.
|
| Sequences |
Amino acid
FASTA format
|
0001 MRVLLFLLLS LFMLPAFSAD NLLRWHDAQH FTVQASTPLK AKRAWKLCAL YPSLKDSYWL SLNYGMQEAA
0071 RRYGVDLKVL EAGGYSQLAT QQAQIDQCKQ WGAEAILLGS STTSFPDLQK QVASLPVIEL VNAIDAPQVK
0141 SRVGVPWFQM GYQPGRYLVQ WAHGKPLNVL LMPGPDNAGG SKEMVEGFRA AIAGSPVRIV DIALGDNDIE
0211 IQRNLLQEML ERHPEIDVVA GTAIAAEAAM GEGRNLKTPL TVVSFYLSHQ VYRGLKRGRV IMAASDQMVW
0281 QGELAVEQAI RQLQGQSVSD NVSPPILVLT PKNADREHIR RSLSPGGFRP VYFYQHTSAA KK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GGTCAGGGTT AAATTCACGG TCGGTGCACT
-070 TTAGGTGAAA AAGGTTGAGT CGCAAAGCGG AATGCATCTA GCATAAAGCC TTATTATTGA TGAGGCTATC
0001 atgcgcgtac tgctattttt acttctttcc cttttcatgt tgccggcatt ttcggctgat aacctgttgc
0071 gctggcatga tgcgcagcat ttcacggtgc aagcctctac gccgcttaaa gccaaacgcg catggaaact
0141 gtgcgcgctt tatcccagcc tgaaagattc atattggtta tcgttgaact atggtatgca ggaggctgct
0211 cgccgctacg gtgtggattt aaaagtgctg gaggcaggcg gctacagcca gttggctacc cagcaagcac
0281 aaatcgacca gtgtaaacag tggggcgcag aggccatttt gctcggtagt agcacgacct catttcccga
0351 cctgcaaaag caggtagcaa gtctgccggt gatcgaactg gtaaatgcta ttgatgctcc ccaggtgaaa
0421 agccgcgttg gtgtgccctg gtttcagatg ggctatcaac cggggcgata tctggtgcaa tgggcgcacg
0491 gtaaaccact gaatgtgctg ttgatgcccg gacccgataa cgccgggggc agtaaggaga tggtcgaggg
0561 ttttcgcgca gccattgccg gaagcccggt gcgtattgtt gatattgcgc ttggtgataa cgatattgaa
0631 atccagcgta acctgttgca ggagatgctg gaacgccatc cagaaatcga cgtcgttgcc ggaacggcca
0701 ttgcggcaga ggcggcaatg ggggaagggc gtaacctgaa aacgccgctt accgtggtgt cgttttatct
0771 ttcacatcag gtgtatcgcg ggctgaagcg gggaagagtg attatggctg ccagcgatca aatggtctgg
0841 cagggggaac tggcggttga gcaggccatc aggcaattac aggggcaatc ggtttctgat aatgtcagcc
0911 caccgatttt agttctgacg ccgaaaaatg ccgaccgtga acatattcgc cgctcgctgt caccaggggg
0981 atttcgtccg gtctattttt atcagcacac atcagcggct aagaaataaC CTTCACCATG TTGCGTCACC
1051 AGTAAATCCG CGCTGAGTTT ATGACGTAAA CGACGAATTA ACACATCGAC GGTGCGCAGG TCAGGGTTTT
1121 CCACCCGAC
|
