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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
|
DE(PLK1608)
,
OCL90-1
(D)
|
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Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
rspB
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Related strains
|
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Strains Search
|
Search strains by gene name:
rspB
Search strains by all related name:
rspB b1580 ECK1575 JW1572
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General information (Go to Linear View: )
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Gene Name
|
rspB
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Alternative name
|
b1580,ECK1575,JW1572
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Location, Length
|
1,650,920 - 1,651,939
(
-
)
;
35.58
min
;
1020
(bp) ,
339
(aa)
|
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Product
|
putative oxidoreductase, Zn-dependent and NAD(P)-binding
|
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Operon Name
|
rspAB
|
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Note
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starvation sensing protein; GO_process: GO:0042594 - response to starvation
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Function
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enzyme; Global regulatory functions
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Gene Ontology
|
GO:0003824
;
catalytic activity ( rspB )
GO:0005488
;
binding ( rspB )
GO:0008152
;
metabolic process ( rspB )
GO:0008270
;
zinc ion binding ( rspB )
GO:0016491
;
oxidoreductase activity ( rspB )
GO:0046872
;
metal ion binding ( rspB )
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PID
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1787863
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EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
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Entry name(Acc.no)
|
RSPB_ECOLI
(
P38105
)
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- Protein name
|
Starvation sensing protein rspB
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- Synonyms
|
EC 1.1.1.-
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- Gene name
|
Name=rspB; OrderedLocusNames=b1580;
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MMBR References
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Science. 1994;265(5171):537-9.
Sensing starvation: a homoserine lactone--dependent signaling pathway in Escherichia coli.
Huisman GW, Kolter R.
(
7545940
)
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| Sequences |
Amino acid
FASTA format
|
0001 MKSILIEKPN QLAIVEREIP TPSAGEVRVK VKLAGICGSD SHIYRGHNPF AKYPRVIGHE FFGVIDAVGE
0071 GVESARVGER VAVDPVVSCG HCYPCSIGKP NVCTTLAVLG VHADGGFSEY AVVPAKNAWK IPEAVADQYA
0141 VMIEPFTIAA NVTGHGQPTE NDTVLVYGAG PIGLTIVQVL KGVYNVKNVI VADRIDERLE KAKESGADWA
0211 INNSQTPLGE IFTEKGIKPT LIIDAACHPS ILKEAVTLAS PAARIVLMGF SSEPSEVIQQ GITGKELSIF
0281 SSRLNANKFP IVIDWLSKGL IKPEKLITHT FDFQHVADAI SLFEQDQKHC CKVLLTFSE
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tcgatgaaaa gctggcggcg aaatatccct
-070 atgaacctgc ttatctacca gtcgcacgtc tggaagatgg cacgctgtgg aactggtaag gagtaagata
0001 atgaaaagca tattaattga aaaaccgaat caactggcga ttgtcgaacg tgaaataccc accccgtcag
0071 cgggtgaagt acgagtaaaa gtgaaacttg ccggaatttg tggttcagat agccatattt atcgtgggca
0141 taatcctttt gcgaaatatc cgcgcgtcat tggtcatgaa ttctttggcg tcattgatgc agtgggtgaa
0211 ggcgtggaaa gcgccagagt cggtgaacgt gttgctgtcg atccggtggt cagctgtggg cattgctatc
0281 cgtgctctat aggtaaaccg aacgtttgta cgacactggc tgtattaggt gtgcacgctg acggtggttt
0351 cagtgaatat gccgtggttc cggcaaaaaa tgcgtggaaa attcctgaag cagtggccga tcaatatgcg
0421 gtaatgatcg aaccttttac cattgcggct aacgtaaccg gacatggtca accgactgaa aatgataccg
0491 ttctggttta tggtgccggt ccaatcggcc tgacgatcgt tcaggtatta aaaggcgtct ataacgttaa
0561 aaatgtgatt gttgccgatc gcattgatga acgactggaa aaagcgaaag agagcggggc tgactgggcg
0631 attaataaca gccagacacc gcttggcgag attttcactg aaaaaggcat caagccgaca ttaattatcg
0701 atgcggcttg tcatccttct atcctgaaag aggccgtaac gctggcttct ccagcggcac gtattgtatt
0771 gatggggttc tccagtgaac cgtctgaagt gattcagcaa ggaattaccg gaaaagaact ctctattttc
0841 tcttcacgct taaatgcaaa taaattcccg atcgttatcg actggttaag taaagggtta attaaaccag
0911 aaaaattaat tacccatacg tttgatttcc agcatgttgc tgatgccatt agtttatttg aacaggatca
0981 aaaacattgc tgcaaagtct tactcacttt ttctgaataa taccaataac ggcgagtaag tagtacgcat
1051 cttacctctt ttttagagat aaccattatg acaatagaaa aacacgaaag aagcactaag gatttggtga
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