MG1655
W3110
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Gene Report : ppiD
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion OCR40 (D)  ,  OCR40-2 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  ppiD
Related strains
     Strains Search Search strains by gene name:  ppiD   Search strains by all related name:  ppiD b0441 ECK0435 JW0431 o623 ybaU

General information  (Go to Linear View:)
 Gene Name ppiD  
 Alternative name b0441,ECK0435,JW0431,o623,ybaU  
 Location, Length 461,139 - 463,010 (  +  ) ;   9.94 min ; 1872 (bp) ,   623 (aa) Go to Linear View
 Product periplasmic folding chaperone, has an inactive PPIase domain  
 Operon Name ppiD  
 Note GO_process: GO:0006457 - protein folding  
 Function putative factor; Not classified  
 Gene Ontology GO:0003755 ; peptidyl-prolyl cis-trans isomerase activity ( ppiD )
GO:0005886 ; plasma membrane ( ppiD )
GO:0006457 ; protein folding ( ppiD )
GO:0006950 ; response to stress ( ppiD )
GO:0016020 ; membrane ( ppiD )
GO:0016021 ; integral to membrane ( ppiD )
GO:0016853 ; isomerase activity ( ppiD )
GO:0042597 ; periplasmic space ( ppiD )
 PID 1786645  
 EC number
  (KEGG Pathway)   		5.2.1.8  
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) PPID_ECOLI ( P77241 )
    -  Protein name Peptidyl-prolyl cis-trans isomerase D  
    -  Synonyms EC 5.2.1.8, PPIase D, Rotamase D  
    -  Gene name Name=ppiD; OrderedLocusNames=b0441, c0557;  

 Linear View (Whole Mode)
View Location
   450.0  –  475.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP ppiD (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Crystallographic Structure Of Sura, A Molecular Chaperone That Facilitates Outer Membrane Porin Folding  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D)  
         PSI-BLAST Myosin-1
    nr     (database updated : 2007.02.20 )
         BLAST peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    TYR_PHOSPHO_SITE    MYRISTYL    PPIC_PPIASE     

Other Cross-Reference
    COG COG0760O 
    EcoCyc ppiD 

Sequences
Amino acid
FASTA format 
0001 MMDSLRTAAN SLVLKIIFGI IIVSFILTGV SGYLIGGGNN YAAKVNDQEI SRGQFENAFN SERNRMQQQL 
0071 GDQYSELAAN EGYMKTLRQQ VLNRLIDEAL LDQYARELKL GISDEQVKQA IFATPAFQVD GKFDNSRYNG 
0141 ILNQMGMTAD QYAQALRNQL TTQQLINGVA GTDFMLKGET DELAALVAQQ RVVREATIDV NALAAKQPVT 
0211 EQEIASYYEQ NKNNFMTPEQ FRVSYIKLDA ATMQQPVSDA DIQSYYDQHQ DQFTQPQRTR YSIIQTKTED 
0281 EAKAVLDELN KGGDFAALAK EKSADIISAR NGGDMGWLED ATIPDELKNA GLKEKGQLSG VIKSSVGFLI 
0351 VRLDDIQPAK VKSLDEVRDD IAAKVKHEKA LDAYYALQQK VSDAASNDTE SLAGAEQAAG VKATQTGWFS 
0421 KDNLPEELNF KPVADAIFNG GLVGENGAPG INSDIITVDG DRAFVLRISE HKPEAVKPLA DVQEQVKALV 
0491 QHNKAEQQAK VDAEKLLVDL KAGKGAEAMQ AAGLKFGEPK TLSRSGRDPI SQAAFALPLP AKDKPSYGMA 
0561 TDMQGNVVLL ALDEVKQGSM PEDQKKAMVQ GITQNNAQIV FEALMSNLRK EAKIKIGDAL EQQ
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             GGGCTGACAA TTGCCCCCGT TTCTTGTCAC 
-070 AATAGGCCTT TGCGCGCATC GATACGTTGC GTGAGGTACA CAGTCATCTA CAGCGGAGTG TTGTTACACC 
0001 atgatggaca gcttacgcac ggctgcaaac agtctcgtgc tcaagattat tttcggtatc attatcgtgt 
0071 cgttcatatt gaccggcgtg agtggttacc tgattggcgg aggcaataac tacgccgcaa aagtgaatga 
0141 ccaggaaatc agccgtgggc aattcgagaa cgccttcaac agcgagcgta atcgcatgca gcaacagctg 
0211 ggcgatcaat actccgagct ggcagcgaac gaaggctata tgaaaaccct gcgtcaacag gtgctgaatc 
0281 gtctgatcga cgaggcgctg ctggatcagt acgcacgtga gctgaaactg ggtatcagcg atgagcaggt 
0351 taaacaggcg attttcgcga ccccagcctt ccaggttgac ggcaaatttg ataacagccg ctataacggt 
0421 atcctcaacc agatggggat gaccgccgat cagtacgccc aggcgctgcg taaccagctc actacccaac 
0491 agctgattaa cggcgttgcc ggtaccgatt ttatgctgaa aggtgaaacc gacgagctgg cggcactggt 
0561 cgcgcaacaa cgcgtggtgc gtgaggcgac tatcgatgtt aacgcgctgg cggcgaagca gcctgtgacc 
0631 gaacaggaga ttgccagcta ctacgaacaa aacaaaaaca atttcatgac gccggaacaa ttccgcgtga 
0701 gttacatcaa gctggatgcc gcaacgatgc agcaaccggt tagcgatgcg gatatccaga gctactacga 
0771 ccagcatcag gatcaattca cccagccgca gcgtacccgc tacagcatca tccagaccaa aactgaagat 
0841 gaagcgaaag cggtacttga tgagctgaat aaaggcggtg attttgctgc attagccaaa gaaaaatctg 
0911 ccgatattat ctctgctcgt aacggcggcg atatgggttg gttagaagat gccactatcc cggacgaact 
0981 gaaaaatgct ggtctgaaag aaaaaggcca actgtctggt gtcatcaaat cttcggtcgg tttcctgatt 
1051 gtacgtctgg acgacattca gccagcgaaa gtgaaatcgt tagacgaagt acgtgacgac attgcggcga 
1121 aagtgaaaca cgaaaaagcc ctcgatgcgt actacgcgct gcagcagaaa gtgagcgatg cggcaagcaa 
1191 cgacaccgag tctctggccg gtgcagagca agctgccggc gttaaagcca ctcagacggg ttggttcagc 
1261 aaagataacc tgccggaaga gttgaacttc aagccggttg ccgacgctat ctttaacggc ggtctggtag 
1331 gtgaaaacgg cgcgccgggc atcaactctg acatcatcac cgtagacggc gaccgcgcat tcgtgctgcg 
1401 catcagcgag cacaaaccgg aagcggtgaa accgttggca gatgttcagg aacaagttaa ggcattggtt 
1471 cagcacaaca aagctgaaca acaggcgaaa gtggatgctg agaaactgct ggttgatttg aaagccggca 
1541 aaggtgcgga agctatgcag gctgccggtc tgaaatttgg cgagccgaaa accttaagcc gttccggtcg 
1611 tgacccgatt agccaggcgg cgtttgcact gccactgcca gcgaaagaca aaccgagcta cggtatggcg 
1681 accgatatgc aaggtaatgt ggttctgctg gcgctggatg aagtgaaaca aggttcaatg ccggaagatc 
1751 agaaaaaagc gatggtgcag ggtatcaccc agaacaacgc acaaatcgtc tttgaagctc tgatgagtaa 
1821 cctgcgtaaa gaggcgaaaa tcaaaattgg cgatgcgctg gaacagcaat aaTCCTGAAG CCGCCTCGCA 
1891 AAAAAATGCG TTGCAGCTGT AACAAGAAAA GGTCGCTTTC GCGGCCTTTT CCATTTCTGA ACATTGCCAT 
1961 TTGTTTACTG TT