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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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Deletion
|
OCL53,54-1
(D)
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Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
pdxJ
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Related strains
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Strains Search
|
Search strains by gene name:
pdxJ
Search strains by all related name:
pdxJ b2564 ECK2562 JW2548
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General information (Go to Linear View: )
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Gene Name
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pdxJ
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Alternative name
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b2564,ECK2562,JW2548
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Location, Length
|
2,699,020 - 2,699,751
(
-
)
;
58.17
min
;
732
(bp) ,
243
(aa)
|
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Product
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pyridoxine 5'-phosphate synthase
|
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Operon Name
|
rnc-era-recO-pdxJ-acpS
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Note
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pyridoxine biosynthesis; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0008615 - pyridoxine biosynthetic process
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Function
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enzyme; Biosynthesis of cofactors, carriers: Pyridoxine
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Gene Ontology
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GO:0003824
;
catalytic activity ( pdxJ )
GO:0005737
;
cytoplasm ( pdxJ )
GO:0008152
;
metabolic process ( pdxJ )
GO:0008615
;
pyridoxine biosynthetic process ( pdxJ )
GO:0016740
;
transferase activity ( pdxJ )
GO:0016769
;
transferase activity, transferring nitrogenous groups ( pdxJ )
GO:0033856
;
pyridoxine 5'-phosphate synthase activity ( pdxJ )
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PID
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1788917
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EC number
(KEGG Pathway)
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
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EcoGene
|
pdxJ
(
EG10693
)
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Number of removed
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1 aa cleaved
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SWISS-PROT
(
Show details
[
1
more]
)
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Entry name(Acc.no)
|
PDXJ_ECOLI
(
P24223
)
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- Protein name
|
Pyridoxal phosphate biosynthetic protein pdxJ
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- Synonyms
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PNP synthase
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- Gene name
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Name=pdxJ; OrderedLocusNames=b2564, z3845, ECs3430;
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MMBR References
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J Bacteriol. 1992;174:1554-1567
Suppression of insertions in the complex pdxJ operon of Escherichia coli K-12 by lon and other mutations.
Lam, H. L., E. Tancula, W. B. Dempsey, and M. E. Winkler.
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J Bacteriol. 1992;174:1544-1553
Locating essential Escherichia coli genes by using mini-Tn10 transposons: the pdxJ operon.
Takiff, H. E., T. Baker, T. Copeland, S. M. Chen, and D. L. Court.
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| Sequences |
Amino acid
FASTA format
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0001 MAELLLGVNI DHIATLRNAR GTAYPDPVQA AFIAEQAGAD GITVHLREDR RHITDRDVRI LRQTLDTRMN
0071 LEMAVTEEML AIAVETKPHF CCLVPEKRQE VTTEGGLDVA GQRDKMRDAC KRLADAGIQV SLFIDADEEQ
0141 IKAAAEVGAP FIEIHTGCYA DAKTDAEQAQ ELARIAKAAT FAASLGLKVN AGHGLTYHNV KAIAAIPEMH
0211 ELNIGHAIIG RAVMTGLKDA VAEMKRLMLE ARG
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 agccgtatct tggcggtaaa cctttaaaga
-070 gcagggaact gttccggcag tttatgccta agcgaacggt gaaaacacat tatgaatgat gaggattgtc
0001 atggctgaat tactgttagg cgtcaacatt gaccatatcg ctacgctgcg caacgcgcgc ggtaccgctt
0071 acccggatcc ggtgcaggcc gcgtttattg ccgagcaggc gggagcggac ggcattaccg tgcatttacg
0141 tgaagatcgc cgtcacatta ctgaccgcga cgtgcgcatc ctgcgtcaga cgctggatac ccgcatgaat
0211 ctggagatgg cggtgaccga agagatgctg gcgatcgccg ttgagacgaa gccacatttt tgctgcctgg
0281 taccggaaaa gcgtcaggaa gtaacaaccg aaggcggcct ggatgtcgca gggcagcgtg acaaaatgcg
0351 cgatgcctgc aaacgtctgg cagatgccgg gattcaggtt tctctgttta ttgacgccga tgaagagcag
0421 atcaaagctg cggcagaggt tggcgcaccg tttatcgaga tccacaccgg ttgctatgct gatgccaaaa
0491 ctgacgccga acaggcgcaa gagctggcgc gtatcgccaa agccgcgacc tttgccgcaa gcctcggtct
0561 gaaagttaac gccggacacg gtctgaccta tcacaacgtg aaagccattg ccgccatccc tgagatgcat
0631 gaactgaata tcggtcatgc cattattggt cgtgcagtga tgaccggact gaaagatgcg gtggcagaaa
0701 tgaagcgtct gatgctggaa gcgcgtggct aatggcaata ttaggtttag gcacggatat tgtggagatc
0771 gctcgcatcg aagcggtgat cgcccgatcc ggtgatcgcc tggcacgccg cgtattaagc ga
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