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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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Deletion
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
pdxH
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Related strains
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Strains Search
|
Search strains by gene name:
pdxH
Search strains by all related name:
pdxH b1638 ECK1634 JW1630
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General information (Go to Linear View: )
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Gene Name
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pdxH
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Alternative name
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b1638,ECK1634,JW1630
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Location, Length
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1,715,375 - 1,716,031
(
-
)
;
36.97
min
;
657
(bp) ,
218
(aa)
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Product
|
pyridoxine 5'-phosphate oxidase
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Operon Name
|
pdxH-tyrS-pdxY
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Note
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pyridoxinephosphate oxidase; GO_process: GO:0008615 - pyridoxine biosynthetic process
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Function
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enzyme; Biosynthesis of cofactors, carriers: Pyridoxine
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Gene Ontology
|
GO:0004733
;
pyridoxamine-phosphate oxidase activity ( pdxH )
GO:0008615
;
pyridoxine biosynthetic process ( pdxH )
GO:0010181
;
FMN binding ( pdxH )
GO:0016491
;
oxidoreductase activity ( pdxH )
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PID
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1787926
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EC number
(KEGG Pathway)
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1.4.3.5
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
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EcoGene
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pdxH
(
EG11487
)
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Number of removed
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1 aa cleaved
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
|
PDXH_ECOLI
(
P28225
)
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- Protein name
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Pyridoxamine 5'-phosphate oxidase
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- Synonyms
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EC 1.4.3.5, PNP/PMP oxidase, PNPOx
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- Gene name
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Name=pdxH; OrderedLocusNames=b1638, SF1663, S1795;
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MMBR References
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J Bacteriol. 1971;107(2):580-2.
Identification of the forms of vitamin B 6 present in the culture media of "vitamin B 6 control" mutants.
Dempsey WB, Arcement LJ.
(
4939769
)
|
Arch Microbiol. 1988;150(4):363-7.
Temperature-sensitive murein synthesis in an Escherichia coli pdx mutant and the role of alanine racemase.
Grogan DW.
(
3060037
)
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Mol Gen Genet. 1984;196(2):367-72.
Genetic characterization of the Escherichia coli cyclopropane fatty acid (cfa) locus and neighboring loci.
Grogan DW, Cronan JE Jr.
(
6092874
)
|
J Bacteriol. 1992;174:6033-6045
Characterization of the complex pdxH-tyrS operon of Escherichia coli K-12 and pleiotropic phenotypes caused by pdxH insertion mutations.
Lam, H. M., and M. E. Winkler.
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J Bacteriol. 1976;127(3):1593-4.
Genetic map position of the pdxH gene in Escherichia coli.
Shimizu S, Dempsey WB.
(
783152
)
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| Sequences |
Amino acid
FASTA format
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0001 MSDNDELQQI AHLRREYTKG GLRRRDLPAD PLTLFERWLS QACEAKLADP TAMVVATVDE HGQPYQRIVL
0071 LKHYDEKGMV FYTNLGSRKA HQIENNPRVS LLFPWHTLER QVMVIGKAER LSTLEVMKYF HSRPRDSQIG
0141 AWVSKQSSRI SARGILESKF LELKQKFQQG EVPLPSFWGG FRVSLEQIEF WQGGEHRLHD RFLYQRENDA
0211 WKIDRLAP
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 atcgtcttga ataactgtca gttacaaaat
-070 ccacagcgtt gagatttttc caggggcggc gcacaatagc gtcacccact gacaatccgt aaagaaaacc
0001 atgtctgata acgacgaatt gcagcaaatc gcgcatctgc gccgtgaata caccaaaggc gggttacgcc
0071 gccgcgatct tcccgccgat ccattaaccc tttttgaacg ttggctctct caggcttgtg aagccaaact
0141 ggcggaccct accgcgatgg tggtcgctac cgtggatgaa catggtcagc cttatcagcg catcgtttta
0211 ctcaaacatt acgacgaaaa aggcatggtg ttttacacca acctcggcag ccgtaaagca catcaaatcg
0281 aaaataatcc gcgcgttagc ctgctgttcc cgtggcatac ccttgagcgc caggtgatgg tgatcggtaa
0351 agcagaacga ctttcgactc tcgaagtgat gaaatatttt catagccgcc cgcgtgatag ccagattggt
0421 gcatgggttt cgaagcagtc cagtcgcatt tctgcccgcg gtatccttga aagtaaattc ctggagctga
0491 agcagaagtt tcaacagggc gaagtgccat tgccgagctt ttggggcggt tttcgcgtca gccttgaaca
0561 gattgagttc tggcagggtg gtgagcatcg cctgcatgac cgctttttgt accagcgtga aaatgatgcg
0631 tggaagattg atcgtcttgc accctgaaaa gatgcaaaaa tcttgcttta atcgctggta ctcctgattc
0701 tggcacttta ttctatgtct ctttcgcatc tggcgaaaag tcgtgtaccg gcaaagg
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