|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR56
(D)
,
OCR56-3
(D)
,
OCR56-7
(D)
,
OCR56-8
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
matP
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
matP
Search strains by all related name:
matP b0956 ECK0947 JW0939 ycbG
|
General information (Go to Linear View: )
|
|
Gene Name
|
matP
|
|
Alternative name
|
b0956,ECK0947,JW0939,ycbG
|
|
Location, Length
|
1,017,708 - 1,018,160
(
+
)
;
21.93
min
;
453
(bp) ,
150
(aa)
|
|
Product
|
Ter macrodomain organizer matS-binding protein
|
|
Operon Name
|
matP
|
|
Note
|
putative dehydrogenase
|
|
Function
|
factor; DNA - replication, repair,restriction/modification
|
|
Gene Ontology
|
|
|
PID
|
1787190
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YCBG_ECOLI
(
P45569
;
P75868; Q83RX3
)
|
|
- Protein name
|
Hypothetical UPF0268 protein ycbG.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ycbG; OrderedLocusNames=b0956, z1306, ECs1040, SF0956, S1022;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ycbG
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0268 protein ycbG
|
|
PSI-BLAST
|
UPF0268 protein ycbG
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein Z1306 [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
|
| Sequences |
Amino acid
FASTA format
|
0001 MKYQQLENLE SGWKWKYLVK KHREGELITR YIEASAAQEA VDVLLSLENE PVLVNGWIDK HMNPELVNRM
0071 KQTIRARRKR HFNAEHQHTR KKSIDLEFIV WQRLAGLAQR RGKTLSETIV QLIEDAENKE KYANKMSSLK
0141 QDLQALLGKE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CTGGCATGGG CGTTAAAGCT CACAGGATGG
-070 AGATTCTTTT CTTCACTGGC CTAAAAAGCT GATATTCTGT AAAGAGTTAC ACGGTAACAT TGAGATCGCT
0001 atgaaatatc aacaacttga aaatcttgaa agcggttgga aatggaagta tctggttaag aagcatcgcg
0071 aaggggagtt aatcacccgt tacatagaag ccagtgccgc ccaggaagcc gtcgatgtgt tgctctcgct
0141 ggaaaatgaa cccgtgctgg taaatggctg gattgacaag catatgaatc cggaactggt caatcgcatg
0211 aagcaaacca ttcgggcaag acgaaagcgc cattttaatg cggaacacca gcatacgcgc aaaaaatcga
0281 tcgatctgga atttattgtc tggcaacgtc tggctggtct tgcgcagcgt cgcggtaaaa cgctttctga
0351 aacgattgtt cagctgattg aagatgcgga aaacaaagag aaatacgcga ataaaatgtc ttctctgaag
0421 caggatctgc aggcattgct gggtaaggaa taaCTGACGA AAGTCAGTTC AATTTACTAA AGGCAAAAAA
0491 AACCCCGCAG CAGCGGGGTT TTTCTACCAG ACGAGAACTT AAGCCTGCGG CTGAGTTACA ACG
|
