PEC Original Annotations
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Essentiality
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Class
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essential
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References (PMID)
|
|
Deletion
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OCR33,35-4 (AK4-2 / BK5-2)
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
bamA
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Related strains
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Strains Search
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Search strains by gene name:
bamA
Search strains by all related name:
bamA b0177 ecfK ECK0176 JW0172 o810 omp85 yaeT yzzN yzzY
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General information (Go to Linear View:)
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Gene Name
|
bamA
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Alternative name
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b0177,ecfK,ECK0176,JW0172,o810,omp85,yaeT,yzzN,yzzY
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Location, Length
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197,928 - 200,360
(
+
)
;
4.27
min
;
2433
(bp) ,
810
(aa)
|
Product
|
outer membrane protein assembly factor, forms pores; required for OM biogenesis; in BamABCDE OM protein complex
|
Operon Name
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bamA-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE
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Note
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putative outer membrane antigen; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane
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Function
|
|
Gene Ontology
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GO:0009279
;
cell outer membrane ( yaeT )
GO:0016020
;
membrane ( yaeT )
GO:0019867
;
outer membrane ( yaeT )
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PID
|
1786374
|
EC number
(KEGG Pathway)
|
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
EcoGene
|
ecfK
(
EG12676
)
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Number of removed
|
20 aa cleaved
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
UP05_ECOLI
(
P39170
;
P39181; P77465
)
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- Protein name
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Unknown protein from 2D-page spots M62/M63/O3/O9/T35 precursor.
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- Synonyms
|
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- Gene name
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OrderedLocusNames=b0177, c0214, z0188, ECs0179, SF0167, S0170;
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Sequences |
Amino acid
FASTA format
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0001 MAMKKLLIAS LLFSSATVYG AEGFVVKDIH FEGLQRVAVG AALLSMPVRT GDTVNDEDIS NTIRALFATG
0071 NFEDVRVLRD GDTLLVQVKE RPTIASITFS GNKSVKDDML KQNLEASGVR VGESLDRTTI ADIEKGLEDF
0141 YYSVGKYSAS VKAVVTPLPR NRVDLKLVFQ EGVSAEIQQI NIVGNHAFTT DELISHFQLR DEVPWWNVVG
0211 DRKYQKQKLA GDLETLRSYY LDRGYARFNI DSTQVSLTPD KKGIYVTVNI TEGDQYKLSG VEVSGNLAGH
0281 SAEIEQLTKI EPGELYNGTK VTKMEDDIKK LLGRYGYAYP RVQSMPEIND ADKTVKLRVN VDAGNRFYVR
0351 KIRFEGNDTS KDAVLRREMR QMEGAWLGSD LVDQGKERLN RLGFFETVDT DTQRVPGSPD QVDVVYKVKE
0421 RNTGSFNFGI GYGTESGVSF QAGVQQDNWL GTGYAVGING TKNDYQTYAE LSVTNPYFTV DGVSLGGRLF
0491 YNDFQADDAD LSDYTNKSYG TDVTLGFPIN EYNSLRAGLG YVHNSLSNMQ PQVAMWRYLY SMGEHPSTSD
0561 QDNSFKTDDF TFNYGWTYNK LDRGYFPTDG SRVNLTGKVT IPGSDNEYYK VTLDTATYVP IDDDHKWVVL
0631 GRTRWGYGDG LGGKEMPFYE NFYAGGSSTV RGFQSNTIGP KAVYFPHQAS NYDPDYDYEC ATQDGAKDLC
0701 KSDDAVGGNA MAVASLEFIT PTPFISDKYA NSVRTSFFWD MGTVWDTNWD SSQYSGYPDY SDPSNIRMSA
0771 GIALQWMSPL GPLVFSYAQP FKKYDGDKAE QFQFNIGKTW
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATCGCATTGG CTCGATTCTG CTGGTGCTGT
-070 TAATGGGGCT TGCACTTTTC AATGATTTCT CTCGGTTATG AGAGTTAGTT AGGAAGAACG CATAATAACG
0001 atggcgatga aaaagttgct catagcgtcg ctgctgttta gcagcgccac cgtatacggt gctgaagggt
0071 tcgtagtgaa agatattcat ttcgaaggcc ttcagcgtgt cgccgttggt gcggccctcc tcagtatgcc
0141 ggtgcgcaca ggcgacacgg ttaatgatga agatatcagt aataccattc gcgctctgtt tgctaccggc
0211 aactttgagg atgttcgcgt ccttcgtgat ggtgataccc ttctggttca ggtaaaagaa cgtccgacca
0281 ttgccagcat tactttctcc ggtaacaaat cggtgaaaga tgacatgctg aagcaaaacc tcgaggcttc
0351 tggtgtgcgt gtgggcgaat ccctcgatcg caccaccatt gccgatatcg agaaaggtct ggaagacttc
0421 tactacagcg tcggtaaata tagcgccagc gtaaaagctg tcgtgacccc gctgccgcgc aaccgtgttg
0491 acctaaaact ggtgttccag gaaggtgtgt cagctgaaat ccagcaaatt aacattgttg gtaaccatgc
0561 tttcaccacc gacgaactga tctctcattt ccaactgcgt gacgaagtgc cgtggtggaa cgtggtaggc
0631 gatcgtaaat accagaaaca gaaactggcg ggcgaccttg aaaccctgcg cagctactat ctggatcgcg
0701 gttatgcccg tttcaacatc gactctaccc aggtcagtct gacgccagat aaaaaaggta tttacgtcac
0771 ggtgaacatc accgaaggcg atcagtacaa gctttctggc gttgaagtga gcggcaacct tgccgggcac
0841 tccgctgaaa ttgagcagct gactaagatc gagccgggtg agctgtataa cggcaccaaa gtgaccaaga
0911 tggaagatga catcaaaaag cttctcggtc gctatggtta tgcctatccg cgcgtacagt cgatgcccga
0981 aattaacgat gccgacaaaa ccgttaaatt acgtgtgaac gttgatgcgg gtaaccgttt ctacgtgcgt
1051 aagatccgtt ttgaaggtaa cgatacctcg aaagatgccg tcctgcgtcg cgaaatgcgt cagatggaag
1121 gtgcatggct ggggagcgat ctggtcgatc agggtaagga gcgtctgaat cgtctgggct tctttgaaac
1191 tgtcgatacc gatacccaac gtgttccggg tagcccggac caggttgatg tcgtctacaa ggtaaaagag
1261 cgcaacaccg gtagcttcaa ctttggtatt ggttacggta ctgaaagtgg cgtgagcttc caggctggtg
1331 tgcagcagga taactggtta ggtacaggtt atgctgttgg tatcaacggg accaaaaacg attaccagac
1401 ctatgctgaa ctgtcggtaa ccaacccgta cttcaccgta gatggcgtaa gcctcggtgg tcgtctcttc
1471 tataatgact tccaggcaga tgacgccgac ctgtccgact ataccaacaa gagttatggt acagacgtga
1541 cgttgggctt cccgattaac gaatataact cgctgcgtgc aggtctgggt tatgtacata actccctgtc
1611 caacatgcag cctcaggttg cgatgtggcg ttatctgtac tctatgggtg aacatccgag cacctctgat
1681 caggataaca gcttcaaaac ggacgacttc acgttcaact atggttggac ctataacaag cttgaccgtg
1751 gttacttccc gacagatggt tcacgtgtca acctgaccgg taaagtgacc attcctggat cggataacga
1821 atactacaaa gtgacgttag acacggcgac ttatgtgccg atcgatgacg atcacaaatg ggttgttctg
1891 gggcgtaccc gctggggtta tggtgatggt ttaggcggca aagagatgcc gttctacgag aacttctatg
1961 ccggtggttc cagcaccgtg cgtggcttcc agtccaatac cattggtccg aaagcagttt acttcccgca
2031 tcaggccagt aattatgatc cggactatga ttacgaatgt gcgactcagg acggcgcgaa agacctgtgt
2101 aaatcggatg atgctgtagg cggtaacgcc atggcggttg ccagcctcga gttcatcacc ccgacgccgt
2171 ttattagcga taagtatgct aactcggttc gtacttcctt cttctgggat atgggtaccg tttgggatac
2241 aaactgggat tccagccaat attctggata tccggactat agtgatccaa gcaatatccg tatgtctgcg
2311 ggtatcgcat tacaatggat gtccccattg gggccgttgg tgttctccta cgcccagccg ttcaaaaagt
2381 acgatggaga caaggcagaa cagttccagt ttaacatcgg taaaacctgg taaGTGTTCT CCACAAAGGA
2451 ATGTAGTGGT AGTGTAGCGA TGACTTTAGG CGATCAATAT AAGATCGCCG GGCCACGCAA AGAACTGCAC
2521 CCTCCGGTGC AAA
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