|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
mgrR
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
mgrR
Search strains by all related name:
mgrR b4698 ECK4510
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
mgrR
|
|
Alternative name
|
b4698,ECK4510
|
|
Location, Length
|
1,620,841 - 1,620,938
(
-
)
;
34.93
min
;
98
(bp) ,
|
|
Product
|
sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides
|
|
Operon Name
|
|
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Note
|
|
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Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cggaagaaat cgctgcatgt ttattgacga
-070 acaaaatgtg attaaccgag tttaagctcc gtttaacatt cattgagaaa actgatgcta ctgtgtcaac
0001 gattcgttat cagtgcagga aaatgcctgt tagcgtaaaa gcaaaacaca aatctatcca tgcaagcatt
0071 caccgccggt ttactggcgg ttttttttcg ccgtcataaa aatcaggccc cttgtacaca actgtaacaa
0141 ggggccggtt aggtgaggga ttatctccgt tcattagtca tcccatttgt ggctgaaa
|
