|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
DE(gpt-lac)5
,
OCR36,37-6 (LD 9C::Ap)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
eyeA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
eyeA
Search strains by all related name:
eyeA b4690 ECK4506 I001
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
eyeA
|
|
Alternative name
|
b4690,ECK4506,I001
|
|
Location, Length
|
271,804 - 271,878
(
+
)
;
5.86
min
;
75
(bp) ,
|
|
Product
|
novel sRNA, function unknown, CP4-6 propahge
|
|
Operon Name
|
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ACGTGATCTG ACAGGCCGTG CAGGAGGAAC
-070 TGGCAGTGAT ACGTAAGCAC TGCCGGTCGA AGGTGTTTTG ACATGTATGC GAAACACCGG GGCAGCAGCG
0001 tctatcacgc ttgcgttgct gacttctgcc aacttgcggc aagcaaggat aaagagtgcg acgggcagcc
0071 tcctcAGTAT GCCTGAGTCC AGGCAGGTAA ACCGGGGAAG GTCAGCGACG GATGTTAAGG GGGCATGGCT
0141 CCGATGACGC GCTGGCTGGC GGAGCTTCCG TAGTA
|
